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  5. Pp3c24_17290V3.1

Pp3c24_17290V3.1


Description : 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit


Gene families : OG0002448 (Archaeplastida) Phylogenetic Tree(s): OG0002448_tree ,
OG_05_0003543 (LandPlants) Phylogenetic Tree(s): OG_05_0003543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_17290V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00034850 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.08 Archaeplastida
AT2G32730 No alias 26S proteasome regulatory complex, non-ATPase... 0.09 Archaeplastida
Cpa|evm.model.tig00000903.41 No alias Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
Cre17.g727950 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
GSVIVT01003914001 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
GSVIVT01003915001 No alias 26S proteasome non-ATPase regulatory subunit 1 homolog A... 0.04 Archaeplastida
GSVIVT01026206001 No alias Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
Gb_01242 No alias regulatory component RPN2 of 26S proteasome 0.04 Archaeplastida
Gb_11079 No alias regulatory component RPN2 of 26S proteasome 0.03 Archaeplastida
LOC_Os04g51910.1 No alias regulatory component RPN2 of 26S proteasome 0.02 Archaeplastida
LOC_Os08g12820.1 No alias regulatory component RPN2 of 26S proteasome 0.07 Archaeplastida
MA_10430856g0020 No alias regulatory component RPN2 of 26S proteasome 0.02 Archaeplastida
MA_30487g0010 No alias regulatory component RPN2 of 26S proteasome 0.03 Archaeplastida
Mp6g04700.1 No alias regulatory component RPN2 of 26S proteasome 0.04 Archaeplastida
Smo167705 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
Solyc05g053650.3.1 No alias regulatory component RPN2 of 26S proteasome 0.02 Archaeplastida
Solyc09g091750.3.1 No alias regulatory component RPN2 of 26S proteasome 0.06 Archaeplastida
Zm00001e006994_P001 No alias regulatory component RPN2 of 26S proteasome 0.06 Archaeplastida
Zm00001e021573_P002 No alias regulatory component RPN2 of 26S proteasome 0.06 Archaeplastida
Zm00001e040048_P001 No alias regulatory component RPN2 of 26S proteasome 0.04 Archaeplastida
Zm00001e041606_P001 No alias regulatory component RPN2 of 26S proteasome 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!