1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c2_17790V3.1

Pp3c2_17790V3.1


Description : No annotation


Gene families : OG0006518 (Archaeplastida) Phylogenetic Tree(s): OG0006518_tree ,
OG_05_0004191 (LandPlants) Phylogenetic Tree(s): OG_05_0004191_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_17790V3.1
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Pp3c15_12720V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c20_5620V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c22_17170V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c5_3950V3.1 No alias No annotation 0.07 Archaeplastida
Pp3c7_22780V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c7_2630V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c8_1100V3.1 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR038717 Tc1-like_DDE_dom 44 108
No external refs found!