Pp3c2_2462V3.1


Description : No annotation


Gene families : OG0000841 (Archaeplastida) Phylogenetic Tree(s): OG0000841_tree ,
OG_05_0001109 (LandPlants) Phylogenetic Tree(s): OG_05_0001109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_2462V3.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_7370V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c11_7550V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c11_7590V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c11_7650V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c11_7700V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c15_2730V3.1 No alias RNA binding;RNA-directed DNA polymerases 0.02 Archaeplastida
Pp3c16_25280V3.1 No alias No annotation 0.08 Archaeplastida
Pp3c19_9339V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c20_9580V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c27_5850V3.1 No alias DNAse I-like superfamily protein 0.03 Archaeplastida
Pp3c3_28850V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c4_24040V3.1 No alias No annotation 0.07 Archaeplastida
Pp3c6_17607V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c7_3520V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c8_9850V3.1 No alias No annotation 0.08 Archaeplastida
Pp3c9_18700V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c9_5750V3.1 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!