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  5. Pp3c2_6200V3.1

Pp3c2_6200V3.1


Description : CDK-subunit 2


Gene families : OG0003144 (Archaeplastida) Phylogenetic Tree(s): OG0003144_tree ,
OG_05_0004895 (LandPlants) Phylogenetic Tree(s): OG_05_0004895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_6200V3.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00038880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclin-dependent kinase... 0.02 Archaeplastida
Cpa|evm.model.tig00020780.5 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.03 Archaeplastida
Cre03.g180350 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.03 Archaeplastida
LOC_Os03g05300.1 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.04 Archaeplastida
MA_156774g0010 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.03 Archaeplastida
MA_364061g0010 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.03 Archaeplastida
MA_475176g0010 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.02 Archaeplastida
MA_66022g0010 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.02 Archaeplastida
MA_98260g0010 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.02 Archaeplastida
Mp1g16700.1 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.07 Archaeplastida
Smo92278 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.02 Archaeplastida
Zm00001e000375_P001 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0035145 exon-exon junction complex IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000789 Cyclin-dep_kinase_reg-sub 4 70
No external refs found!