AT4G34050 (CCoAOMT1)

Aliases : CCoAOMT1

Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Gene families : OG0000361 (Archaeplastida) Phylogenetic Tree(s): OG0000361_tree ,
OG_05_0001358 (LandPlants) Phylogenetic Tree(s): OG_05_0001358_tree ,
OG_06_0001130 (SeedPlants) Phylogenetic Tree(s): OG_06_0001130_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G34050
Cluster	HCCA: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00228690	evm_27.TU.AmTr_v1...	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.03	Archaeplastida
AMTR_s00046p00069700	evm_27.TU.AmTr_v1...	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.02	Archaeplastida
AMTR_s02018p00009260	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AT1G67990	TSM1, ATTSM1	S-adenosyl-L-methionine-dependent methyltransferases...	0.05	Archaeplastida
GSVIVT01015244001	No alias	Enzyme classification.EC_2 transferases.EC_2.1...	0.04	Archaeplastida
GSVIVT01015246001	No alias	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.04	Archaeplastida
GSVIVT01022100001	No alias	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.04	Archaeplastida
GSVIVT01031715001	No alias	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.19	Archaeplastida
Gb_23219	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.04	Archaeplastida
Gb_23220	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.05	Archaeplastida
LOC_Os06g06980.1	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.08	Archaeplastida
LOC_Os08g38900.1	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.1	Archaeplastida
LOC_Os09g30360.1	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.02	Archaeplastida
MA_362678g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_4674g0010	No alias	Enzyme classification.EC_2 transferases.EC_2.1...	0.02	Archaeplastida
MA_667858g0010	No alias	Caffeoyl-CoA O-methyltransferase OS=Pinus taeda...	0.04	Archaeplastida
MA_6811602g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_681896g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_6931g0010	No alias	no hits & (original description: none)	0.09	Archaeplastida
Pp3c23_5530V3.1	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.02	Archaeplastida
Smo101568	No alias	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.02	Archaeplastida
Smo271191	No alias	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.07	Archaeplastida
Smo80209	No alias	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.05	Archaeplastida
Solyc01g107910.4.1	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.05	Archaeplastida
Solyc03g032220.3.1	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.03	Archaeplastida
Solyc05g026040.1.1	No alias	Caffeoyl-CoA O-methyltransferase OS=Stellaria longipes...	0.03	Archaeplastida
Solyc05g041690.3.1	No alias	Enzyme classification.EC_2 transferases.EC_2.1...	0.03	Archaeplastida
Solyc10g050160.2.1	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.07	Archaeplastida
Zm00001e024348_P001	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.08	Archaeplastida
Zm00001e030087_P002	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	TAS	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006598	polyamine catabolic process	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008171	O-methyltransferase activity	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009310	amine catabolic process	None	Extended
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009698	phenylpropanoid metabolic process	RCA	Interproscan
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009804	coumarin metabolic process	None	Extended
BP	GO:0009805	coumarin biosynthetic process	IMP	Interproscan
BP	GO:0009805	coumarin biosynthetic process	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042398	cellular modified amino acid biosynthetic process	RCA	Interproscan
BP	GO:0042402	cellular biogenic amine catabolic process	None	Extended
MF	GO:0042409	caffeoyl-CoA O-methyltransferase activity	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000103	sulfate assimilation	IEP	Neighborhood
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003846	2-acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Neighborhood
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004622	lysophospholipase activity	IEP	Neighborhood
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Neighborhood
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009808	lignin metabolic process	IEP	Neighborhood
BP	GO:0009809	lignin biosynthetic process	IEP	Neighborhood
BP	GO:0009819	drought recovery	IEP	Neighborhood
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Neighborhood
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0010039	response to iron ion	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010252	auxin homeostasis	IEP	Neighborhood
MF	GO:0010283	pinoresinol reductase activity	IEP	Neighborhood
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016710	trans-cinnamate 4-monooxygenase activity	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016841	ammonia-lyase activity	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0019336	phenol-containing compound catabolic process	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0031176	endo-1,4-beta-xylanase activity	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0042447	hormone catabolic process	IEP	Neighborhood
BP	GO:0042546	cell wall biogenesis	IEP	Neighborhood
MF	GO:0042802	identical protein binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
CC	GO:0043230	extracellular organelle	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
MF	GO:0045548	phenylalanine ammonia-lyase activity	IEP	Neighborhood
BP	GO:0046244	salicylic acid catabolic process	IEP	Neighborhood
BP	GO:0046271	phenylpropanoid catabolic process	IEP	Neighborhood
BP	GO:0046274	lignin catabolic process	IEP	Neighborhood
MF	GO:0046409	p-coumarate 3-hydroxylase activity	IEP	Neighborhood
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Neighborhood
MF	GO:0047172	shikimate O-hydroxycinnamoyltransferase activity	IEP	Neighborhood
MF	GO:0047205	quinate O-hydroxycinnamoyltransferase activity	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	Neighborhood
MF	GO:0050737	O-hydroxycinnamoyltransferase activity	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
CC	GO:0070062	extracellular exosome	IEP	Neighborhood
MF	GO:0070566	adenylyltransferase activity	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0071241	cellular response to inorganic substance	IEP	Neighborhood
BP	GO:0071248	cellular response to metal ion	IEP	Neighborhood
BP	GO:0071281	cellular response to iron ion	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
MF	GO:0080116	glucuronoxylan glucuronosyltransferase activity	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
BP	GO:0080167	response to karrikin	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
MF	GO:0097599	xylanase activity	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Neighborhood
CC	GO:1903561	extracellular vesicle	IEP	Neighborhood
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002935	O-MeTrfase_3	47	258

External Links

No external refs found!

AT4G34050 (CCoAOMT1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation