Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG0005303 (Archaeplastida) Phylogenetic Tree(s): OG0005303_tree ,
OG_05_0005936 (LandPlants) Phylogenetic Tree(s): OG_05_0005936_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c3_19050V3.1 | |
Cluster | HCCA: Cluster_180 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G17760 | ATCSTF77, CSTF77 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
Cpa|evm.model.tig00020710.68 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage... | 0.04 | Archaeplastida | |
Cre12.g506050 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage... | 0.04 | Archaeplastida | |
LOC_Os12g38380.1 | No alias | component CstF77/Rna14 of Cleavage Stimulatory Factor... | 0.02 | Archaeplastida | |
MA_18320g0020 | No alias | Cleavage stimulation factor subunit 77 OS=Arabidopsis... | 0.02 | Archaeplastida | |
Mp1g21890.1 | No alias | component CstF77/Rna14 of Cleavage Stimulatory Factor... | 0.03 | Archaeplastida | |
Solyc10g050540.2.1 | No alias | component CstF77/Rna14 of Cleavage Stimulatory Factor... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006397 | mRNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Neighborhood |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
BP | GO:0070085 | glycosylation | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008847 | Suf | 440 | 809 |
No external refs found! |