- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Ribosomal protein S8e family protein
Gene families : OG0001661 (Archaeplastida) Phylogenetic Tree(s): OG0001661_tree ,
OG_05_0001408 (LandPlants) Phylogenetic Tree(s): OG_05_0001408_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c4_11370V3.1 | |
| Cluster | HCCA: Cluster_124 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00055p00155570 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
| AMTR_s00109p00031400 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | Archaeplastida | |
| AT5G20290 | No alias | Ribosomal protein S8e family protein | 0.23 | Archaeplastida | |
| Cpa|evm.model.tig00020610.79 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | Archaeplastida | |
| Cre06.g272800 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.17 | Archaeplastida | |
| GSVIVT01006249001 | No alias | 40S ribosomal protein S8 OS=Zea mays | 0.07 | Archaeplastida | |
| GSVIVT01031566001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.16 | Archaeplastida | |
| GSVIVT01037763001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
| Gb_28325 | No alias | component RPS8 of SSU proteome | 0.12 | Archaeplastida | |
| LOC_Os02g28810.1 | No alias | 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... | 0.13 | Archaeplastida | |
| LOC_Os04g28180.1 | No alias | component RPS8 of SSU proteome | 0.1 | Archaeplastida | |
| MA_10436736g0010 | No alias | 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| MA_14571g0010 | No alias | component RPS8 of SSU proteome | 0.07 | Archaeplastida | |
| MA_4907g0010 | No alias | 40S ribosomal protein S8 OS=Prunus armeniaca... | 0.04 | Archaeplastida | |
| MA_9738483g0010 | No alias | component RPS8 of SSU proteome | 0.05 | Archaeplastida | |
| Mp2g16300.1 | No alias | component RPS8 of SSU proteome | 0.24 | Archaeplastida | |
| Solyc06g007570.3.1 | No alias | component RPS8 of SSU proteome | 0.21 | Archaeplastida | |
| Solyc06g083180.4.1 | No alias | component RPS8 of SSU proteome | 0.22 | Archaeplastida | |
| Solyc07g065170.3.1 | No alias | component RPS8 of SSU proteome | 0.13 | Archaeplastida | |
| Solyc09g057650.3.1 | No alias | component RPS8 of SSU proteome | 0.13 | Archaeplastida | |
| Solyc10g006070.3.1 | No alias | component RPS8 of SSU proteome | 0.11 | Archaeplastida | |
| Zm00001e004092_P002 | No alias | component RPS8 of SSU proteome | 0.13 | Archaeplastida | |
| Zm00001e024994_P001 | No alias | component RPS8 of SSU proteome | 0.03 | Archaeplastida | |
| Zm00001e024995_P001 | No alias | component RPS8 of SSU proteome | 0.18 | Archaeplastida | |
| Zm00001e024996_P001 | No alias | component RPS8 of SSU proteome | 0.06 | Archaeplastida | |
| Zm00001e024999_P001 | No alias | component RPS8 of SSU proteome | 0.06 | Archaeplastida | |
| Zm00001e025000_P003 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| MF | GO:0031369 | translation initiation factor binding | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022309 | Ribosomal_S8e/biogenesis_NSA2 | 1 | 194 |
| No external refs found! |