Description : Ubiquitin supergroup;Ribosomal protein L40e
Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000113 (LandPlants) Phylogenetic Tree(s): OG_05_0000113_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c4_11930V3.1 | |
Cluster | HCCA: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00017p00094950 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.17 | Archaeplastida | |
AMTR_s00040p00104050 | evm_27.TU.AmTr_v1... | Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris | 0.03 | Archaeplastida | |
AMTR_s00095p00146440 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
AMTR_s00101p00053450 | evm_27.TU.AmTr_v1... | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
AT1G23410 | No alias | Ribosomal protein S27a / Ubiquitin family protein | 0.06 | Archaeplastida | |
AT2G36170 | No alias | Ubiquitin supergroup;Ribosomal protein L40e | 0.17 | Archaeplastida | |
AT2G47110 | UBQ6 | ubiquitin 6 | 0.21 | Archaeplastida | |
AT3G52590 | UBQ1, EMB2167,... | ubiquitin extension protein 1 | 0.24 | Archaeplastida | |
AT3G62250 | UBQ5 | ubiquitin 5 | 0.22 | Archaeplastida | |
Cpa|evm.model.tig00022075.50 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
Cre01.g007051 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
Cre06.g273600 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.23 | Archaeplastida | |
GSVIVT01012906001 | No alias | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.1 | Archaeplastida | |
GSVIVT01022543001 | No alias | Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum | 0.04 | Archaeplastida | |
GSVIVT01028198001 | No alias | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.08 | Archaeplastida | |
GSVIVT01033876001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | Archaeplastida | |
GSVIVT01038617001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.2 | Archaeplastida | |
Gb_01257 | No alias | component RPL40 of LSU proteome component | 0.06 | Archaeplastida | |
Gb_15027 | No alias | component RPS27a of SSU proteome | 0.16 | Archaeplastida | |
Gb_40288 | No alias | component RPS27a of SSU proteome | 0.13 | Archaeplastida | |
Gb_41257 | No alias | component RPL40 of LSU proteome component | 0.16 | Archaeplastida | |
LOC_Os01g22490.1 | No alias | component RPS27a of SSU proteome | 0.09 | Archaeplastida | |
LOC_Os03g13170.1 | No alias | component RPL40 of LSU proteome component | 0.12 | Archaeplastida | |
LOC_Os05g06770.1 | No alias | component RPS27a of SSU proteome | 0.06 | Archaeplastida | |
LOC_Os06g44080.1 | No alias | ubiquitin-fold protein (RUB) | 0.04 | Archaeplastida | |
LOC_Os09g39500.1 | No alias | component RPL40 of LSU proteome component | 0.1 | Archaeplastida | |
MA_10435699g0020 | No alias | component RPS27a of SSU proteome | 0.09 | Archaeplastida | |
MA_13101g0020 | No alias | component RPL40 of LSU proteome component | 0.14 | Archaeplastida | |
MA_529552g0010 | No alias | component RPS27a of SSU proteome | 0.16 | Archaeplastida | |
MA_9129425g0010 | No alias | component RPL40 of LSU proteome component | 0.05 | Archaeplastida | |
Mp7g12760.1 | No alias | component RPS27a of SSU proteome | 0.06 | Archaeplastida | |
Mp7g14690.1 | No alias | component RPS27a of SSU proteome | 0.02 | Archaeplastida | |
Mp8g00780.1 | No alias | component RPL40 of LSU proteome component | 0.18 | Archaeplastida | |
Mp8g11720.1 | No alias | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
Pp3c10_25270V3.1 | No alias | ubiquitin extension protein 1 | 0.24 | Archaeplastida | |
Pp3c12_5760V3.1 | No alias | ubiquitin 6 | 0.18 | Archaeplastida | |
Smo111605 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | Archaeplastida | |
Smo93613 | No alias | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
Solyc01g068045.1.1 | No alias | component RPS27a of SSU proteome | 0.19 | Archaeplastida | |
Solyc01g096290.4.1 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
Solyc03g082570.4.1 | No alias | component RPL40 of LSU proteome component | 0.19 | Archaeplastida | |
Solyc08g008590.4.1 | No alias | component RPL40 of LSU proteome component | 0.04 | Archaeplastida | |
Solyc08g083120.3.1 | No alias | component RPL40 of LSU proteome component | 0.2 | Archaeplastida | |
Solyc12g098940.2.1 | No alias | component RPS27a of SSU proteome | 0.15 | Archaeplastida | |
Solyc12g099025.1.1 | No alias | component RPS27a of SSU proteome | 0.14 | Archaeplastida | |
Zm00001e000962_P001 | No alias | component RPL40 of LSU proteome component | 0.09 | Archaeplastida | |
Zm00001e009474_P001 | No alias | component RPL40 of LSU proteome component | 0.16 | Archaeplastida | |
Zm00001e026237_P001 | No alias | component RPS27a of SSU proteome | 0.17 | Archaeplastida | |
Zm00001e028916_P001 | No alias | component RPS27a of SSU proteome | 0.12 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Neighborhood |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
CC | GO:0005840 | ribosome | IEP | Neighborhood |
BP | GO:0006412 | translation | IEP | Neighborhood |
BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006839 | mitochondrial transport | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
BP | GO:0017038 | protein import | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Neighborhood |
CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
CC | GO:0061617 | MICOS complex | IEP | Neighborhood |
BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
BP | GO:0070585 | protein localization to mitochondrion | IEP | Neighborhood |
BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0071806 | protein transmembrane transport | IEP | Neighborhood |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Neighborhood |
CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Neighborhood |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Neighborhood |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |