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  5. Pp3c4_20930V3.1

Pp3c4_20930V3.1


Description : signal recognition particle binding


Gene families : OG0004355 (Archaeplastida) Phylogenetic Tree(s): OG0004355_tree ,
OG_05_0004253 (LandPlants) Phylogenetic Tree(s): OG_05_0004253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_20930V3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00150820 evm_27.TU.AmTr_v1... Protein translocation.endoplasmic... 0.02 Archaeplastida
Solyc03g112450.4.1 No alias component SR-beta of SRP (signal recognition particle)... 0.03 Archaeplastida
Solyc11g043150.2.1 No alias component SR-beta of SRP (signal recognition particle)... 0.02 Archaeplastida
Zm00001e022341_P001 No alias component SR-beta of SRP (signal recognition particle)... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019009 SRP_receptor_beta_su 68 247
No external refs found!