AT4G36590

Description : MADS-box transcription factor family protein

Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G36590
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00262770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	Archaeplastida
AMTR_s00010p00214260	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MADS box...	0.02	Archaeplastida
AT1G72350	No alias	MADS-box transcription factor family protein	0.02	Archaeplastida
AT2G24840	AGL61, DIA	AGAMOUS-like 61	0.04	Archaeplastida
AT3G04100	AGL57	AGAMOUS-like 57	0.05	Archaeplastida
AT3G66656	AGL91	AGAMOUS-like 91	0.04	Archaeplastida
AT4G09960	STK, AGL11	K-box region and MADS-box transcription factor family protein	0.07	Archaeplastida
AT5G23260	AGL32, TT16, ABS	K-box region and MADS-box transcription factor family protein	0.06	Archaeplastida
AT5G60440	AGL62	AGAMOUS-like 62	0.04	Archaeplastida
MA_10432602g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c17_24040V3.1	No alias	AGAMOUS-like 66	0.02	Archaeplastida
Solyc01g106720.1.1	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Zm00001e003667_P001	No alias	transcription factor (MADS/AGL)	0.03	Archaeplastida
Zm00001e016529_P004	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Zm00001e026007_P004	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e030373_P001	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
MF	GO:0050113	inositol oxygenase activity	IEP	Neighborhood
BP	GO:0080113	regulation of seed growth	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
BP	GO:2000014	regulation of endosperm development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	15	62

External Links

No external refs found!