Pp3c5_22920V3.1


Description : photosystem II light harvesting complex gene 2.2


Gene families : OG0000035 (Archaeplastida) Phylogenetic Tree(s): OG0000035_tree ,
OG_05_0031822 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_22920V3.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00031820 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
AT5G28450 No alias Chlorophyll A-B binding family protein 0.02 Archaeplastida
GSVIVT01014074001 No alias Chlorophyll a-b binding protein 2, chloroplastic... 0.02 Archaeplastida
LOC_Os07g38960.1 No alias component LHCa2 of LHC-I complex 0.02 Archaeplastida
Mp2g13460.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Mp7g05530.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g05980.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g06750.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g09340.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Pp3c22_5610V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c2_36190V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c2_36500V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c5_7150V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
CC GO:0033573 high-affinity iron permease complex IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
CC GO:1905862 ferroxidase complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!