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  5. Pp3c5_22920V3.1

Pp3c5_22920V3.1


Description : photosystem II light harvesting complex gene 2.2


Gene families : OG0000035 (Archaeplastida) Phylogenetic Tree(s): OG0000035_tree ,
OG_05_0031822 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_22920V3.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00031820 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
AT5G28450 No alias Chlorophyll A-B binding family protein 0.02 Archaeplastida
GSVIVT01014074001 No alias Chlorophyll a-b binding protein 2, chloroplastic... 0.02 Archaeplastida
LOC_Os07g38960.1 No alias component LHCa2 of LHC-I complex 0.02 Archaeplastida
Mp2g13460.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Mp7g05530.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g05980.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g06750.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g09340.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Pp3c22_5610V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c2_36190V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c2_36500V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c5_7150V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
CC GO:0033573 high-affinity iron permease complex IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
CC GO:1905862 ferroxidase complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!