1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G37950

AT4G37950


Description : Rhamnogalacturonate lyase family protein


Gene families : OG0000794 (Archaeplastida) Phylogenetic Tree(s): OG0000794_tree ,
OG_05_0000615 (LandPlants) Phylogenetic Tree(s): OG_05_0000615_tree ,
OG_06_0000503 (SeedPlants) Phylogenetic Tree(s): OG_06_0000503_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G37950
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G09880 No alias Rhamnogalacturonate lyase family protein 0.03 Archaeplastida
Solyc11g011290.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0016829 lyase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0080117 secondary growth IEP Neighborhood
BP GO:0080190 lateral growth IEP Neighborhood
InterPro domains Description Start Stop
IPR029411 RG-lyase_III 482 672
IPR010325 Rhamnogal_lyase 33 244
IPR029413 RG-lyase_II 398 468
No external refs found!