Pp3c5_880V3.1

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0031831 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c5_880V3.1
Cluster	HCCA: Cluster_234

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.01	Archaeplastida
AT1G01250	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G12890	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G47220	ERF2, ATERF2, ATERF-2	ethylene responsive element binding factor 2	0.02	Archaeplastida
AT5G51990	CBF4, DREB1D	C-repeat-binding factor 4	0.03	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01009801001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01015540001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.08	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.02	Archaeplastida
GSVIVT01017542001	No alias	Ethylene-responsive transcription factor ERF084...	0.03	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.08	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.01	Archaeplastida
Gb_37188	No alias	transcription factor (DREB)	0.2	Archaeplastida
Gb_41433	No alias	transcription factor (DREB)	0.01	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.01	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
LOC_Os10g38000.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_162045g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.01	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_7850076g0010	No alias	no hits & (original description: none)	0.08	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c6_20480V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Smo428344	No alias	No description available	0.01	Archaeplastida
Solyc03g116610.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc06g066540.1.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e018522_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e026573_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	241	290

External Links

No external refs found!

Pp3c5_880V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation