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  5. AT4G39000

AT4G39000 (GH9B17, AtGH9B17)


Aliases : GH9B17, AtGH9B17

Description : glycosyl hydrolase 9B17


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000198 (LandPlants) Phylogenetic Tree(s): OG_05_0000198_tree ,
OG_06_0024851 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39000
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00121890 evm_27.TU.AmTr_v1... Endoglucanase 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00027p00247670 evm_27.TU.AmTr_v1... Endoglucanase 23 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00053p00085940 evm_27.TU.AmTr_v1... Endoglucanase OS=Phaseolus vulgaris 0.03 Archaeplastida
AMTR_s00224p00023160 evm_27.TU.AmTr_v1... Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AT1G02800 ATCEL2, CEL2 cellulase 2 0.07 Archaeplastida
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.05 Archaeplastida
AT1G48930 AtGH9C1, GH9C1 glycosyl hydrolase 9C1 0.04 Archaeplastida
AT1G70710 CEL1, GH9B1, ATGH9B1 glycosyl hydrolase 9B1 0.05 Archaeplastida
AT2G44540 AtGH9B9, GH9B9 glycosyl hydrolase 9B9 0.04 Archaeplastida
AT2G44550 GH9B10, AtGH9B10 glycosyl hydrolase 9B10 0.04 Archaeplastida
AT2G44570 GH9B12, AtGH9B12 glycosyl hydrolase 9B12 0.04 Archaeplastida
AT4G09740 GH9B14, AtGH9B14 glycosyl hydrolase 9B14 0.03 Archaeplastida
GSVIVT01012043001 No alias Endoglucanase 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01019420001 No alias Endoglucanase OS=Phaseolus vulgaris 0.03 Archaeplastida
GSVIVT01024179001 No alias Endoglucanase 24 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01032798001 No alias Endoglucanase 13 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01035481001 No alias Endoglucanase 16 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01037709001 No alias Endoglucanase 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_21395 No alias endo-1,4-beta-glucanase 0.03 Archaeplastida
Gb_26728 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_28546 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g12030.1 No alias Endoglucanase 1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os01g12070.1 No alias Endoglucanase 2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os01g21070.1 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g50490.1 No alias Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g57860.1 No alias Endoglucanase 13 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g12150.1 No alias Endoglucanase 15 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g29770.1 No alias Endoglucanase 20 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
MA_10241783g0010 No alias Endoglucanase 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10430095g0010 No alias Endoglucanase OS=Phaseolus vulgaris (sp|p22503|gun_phavu : 316.0) 0.03 Archaeplastida
MA_107238g0010 No alias Endoglucanase 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_16152g0010 No alias endo-1,4-beta-glucanase 0.03 Archaeplastida
MA_20530g0010 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_76986g0010 No alias Endoglucanase 17 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c16_5450V3.1 No alias glycosyl hydrolase 9A1 0.02 Archaeplastida
Pp3c22_23020V3.1 No alias cellulase 2 0.02 Archaeplastida
Pp3c4_23640V3.1 No alias glycosyl hydrolase 9B7 0.03 Archaeplastida
Pp3c5_9540V3.1 No alias glycosyl hydrolase 9A1 0.03 Archaeplastida
Pp3c6_25940V3.1 No alias glycosyl hydrolase 9C2 0.03 Archaeplastida
Pp3c7_11750V3.1 No alias glycosyl hydrolase 9A4 0.03 Archaeplastida
Smo144066 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo234652 No alias Endoglucanase 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo99802 No alias Endoglucanase 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g014220.3.1 No alias Endoglucanase 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc08g083210.3.1 No alias Endoglucanase 1 OS=Persea americana... 0.04 Archaeplastida
Solyc09g075360.4.1 No alias Endoglucanase 17 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e013509_P001 No alias Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e015739_P002 No alias Endoglucanase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e026190_P002 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e030964_P003 No alias Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e034793_P002 No alias Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e041926_P001 No alias Endoglucanase 13 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004031 aldehyde oxidase activity IEP Neighborhood
MF GO:0004156 dihydropteroate synthase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
MF GO:0005355 glucose transmembrane transporter activity IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010023 proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015149 hexose transmembrane transporter activity IEP Neighborhood
MF GO:0015152 glucose-6-phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0015712 hexose phosphate transport IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016707 gibberellin 3-beta-dioxygenase activity IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0018479 benzaldehyde dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0018488 aryl-aldehyde oxidase activity IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
CC GO:0043076 megasporocyte nucleus IEP Neighborhood
CC GO:0043078 polar nucleus IEP Neighborhood
BP GO:0046653 tetrahydrofolate metabolic process IEP Neighborhood
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Neighborhood
BP GO:0046688 response to copper ion IEP Neighborhood
BP GO:0048317 seed morphogenesis IEP Neighborhood
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070529 L-tryptophan aminotransferase activity IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP Neighborhood
BP GO:0080113 regulation of seed growth IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:2000014 regulation of endosperm development IEP Neighborhood
BP GO:2000029 regulation of proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 26 482
No external refs found!