- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G01305 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00146370 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| AT4G00120 | GT140, IND1, IND, EDA33 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| AT4G36930 | SPT | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT5G09750 | HEC3 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT5G67110 | ALC | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| GSVIVT01030846001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Gb_06182 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os01g61480.1 | No alias | transcription factor (bHLH) | 0.07 | Archaeplastida | |
| LOC_Os03g10770.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_26114g0010 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| MA_306658g0010 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| MA_83500g0010 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| MA_88831g0010 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Pp3c10_19020V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_40040V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Smo405220 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | Archaeplastida | |
| Solyc02g093280.2.1 | No alias | transcription factor (bHLH) | 0.08 | Archaeplastida | |
| Solyc04g077960.1.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Solyc09g005070.1.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e019392_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e021883_P001 | No alias | transcription factor (bHLH) | 0.1 | Archaeplastida | |
| Zm00001e032280_P001 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Zm00001e041668_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000060 | protein import into nucleus, translocation | IEP | Neighborhood |
| BP | GO:0000237 | leptotene | IEP | Neighborhood |
| BP | GO:0000238 | zygotene | IEP | Neighborhood |
| BP | GO:0002218 | activation of innate immune response | IEP | Neighborhood |
| BP | GO:0002253 | activation of immune response | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0007389 | pattern specification process | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| BP | GO:0009410 | response to xenobiotic stimulus | IEP | Neighborhood |
| BP | GO:0009648 | photoperiodism | IEP | Neighborhood |
| BP | GO:0009799 | specification of symmetry | IEP | Neighborhood |
| BP | GO:0009838 | abscission | IEP | Neighborhood |
| BP | GO:0009855 | determination of bilateral symmetry | IEP | Neighborhood |
| BP | GO:0009864 | induced systemic resistance, jasmonic acid mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009911 | positive regulation of flower development | IEP | Neighborhood |
| BP | GO:0009944 | polarity specification of adaxial/abaxial axis | IEP | Neighborhood |
| BP | GO:0009954 | proximal/distal pattern formation | IEP | Neighborhood |
| BP | GO:0009965 | leaf morphogenesis | IEP | Neighborhood |
| BP | GO:0010014 | meristem initiation | IEP | Neighborhood |
| BP | GO:0010016 | shoot system morphogenesis | IEP | Neighborhood |
| BP | GO:0010022 | meristem determinacy | IEP | Neighborhood |
| BP | GO:0010075 | regulation of meristem growth | IEP | Neighborhood |
| BP | GO:0010076 | maintenance of floral meristem identity | IEP | Neighborhood |
| BP | GO:0010077 | maintenance of inflorescence meristem identity | IEP | Neighborhood |
| BP | GO:0010199 | organ boundary specification between lateral organs and the meristem | IEP | Neighborhood |
| BP | GO:0010219 | regulation of vernalization response | IEP | Neighborhood |
| BP | GO:0010220 | positive regulation of vernalization response | IEP | Neighborhood |
| BP | GO:0010227 | floral organ abscission | IEP | Neighborhood |
| BP | GO:0010254 | nectary development | IEP | Neighborhood |
| BP | GO:0010338 | leaf formation | IEP | Neighborhood |
| BP | GO:0010434 | bract formation | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010582 | floral meristem determinacy | IEP | Neighborhood |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Neighborhood |
| BP | GO:0016441 | posttranscriptional gene silencing | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0022403 | cell cycle phase | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0030968 | endoplasmic reticulum unfolded protein response | IEP | Neighborhood |
| BP | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Neighborhood |
| BP | GO:0031540 | regulation of anthocyanin biosynthetic process | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0035265 | organ growth | IEP | Neighborhood |
| BP | GO:0040009 | regulation of growth rate | IEP | Neighborhood |
| BP | GO:0040029 | regulation of gene expression, epigenetic | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| BP | GO:0044848 | biological phase | IEP | Neighborhood |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045927 | positive regulation of growth | IEP | Neighborhood |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0046620 | regulation of organ growth | IEP | Neighborhood |
| BP | GO:0046622 | positive regulation of organ growth | IEP | Neighborhood |
| BP | GO:0048438 | floral whorl development | IEP | Neighborhood |
| BP | GO:0048439 | flower morphogenesis | IEP | Neighborhood |
| BP | GO:0048506 | regulation of timing of meristematic phase transition | IEP | Neighborhood |
| BP | GO:0048509 | regulation of meristem development | IEP | Neighborhood |
| BP | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
| BP | GO:0048573 | photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048584 | positive regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0048638 | regulation of developmental growth | IEP | Neighborhood |
| BP | GO:0048639 | positive regulation of developmental growth | IEP | Neighborhood |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | Neighborhood |
| BP | GO:0048859 | formation of anatomical boundary | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050793 | regulation of developmental process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051094 | positive regulation of developmental process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Neighborhood |
| BP | GO:0051240 | positive regulation of multicellular organismal process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065001 | specification of axis polarity | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:0090691 | formation of plant organ boundary | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0098762 | meiotic cell cycle phase | IEP | Neighborhood |
| BP | GO:0098764 | meiosis I cell cycle phase | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1905393 | plant organ formation | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |