AT5G01310 (APTX)


Aliases : APTX

Description : APRATAXIN-like


Gene families : OG0004162 (Archaeplastida) Phylogenetic Tree(s): OG0004162_tree ,
OG_05_0008820 (LandPlants) Phylogenetic Tree(s): OG_05_0008820_tree ,
OG_06_0009428 (SeedPlants) Phylogenetic Tree(s): OG_06_0009428_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01310
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_18160V3.1 No alias APRATAXIN-like 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle RCA Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006259 DNA metabolic process RCA Interproscan
BP GO:0006310 DNA recombination RCA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0006396 RNA processing RCA Interproscan
BP GO:0006790 sulfur compound metabolic process IDA Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
BP GO:0007131 reciprocal meiotic recombination RCA Interproscan
BP GO:0009150 purine ribonucleotide metabolic process IDA Interproscan
BP GO:0010332 response to gamma radiation RCA Interproscan
BP GO:0010413 glucuronoxylan metabolic process RCA Interproscan
BP GO:0032204 regulation of telomere maintenance RCA Interproscan
BP GO:0033044 regulation of chromosome organization RCA Interproscan
BP GO:0042138 meiotic DNA double-strand break formation RCA Interproscan
BP GO:0043247 telomere maintenance in response to DNA damage RCA Interproscan
BP GO:0045132 meiotic chromosome segregation RCA Interproscan
BP GO:0045492 xylan biosynthetic process RCA Interproscan
MF GO:0047627 adenylylsulfatase activity IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
MF GO:0000150 recombinase activity IEP Neighborhood
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004407 histone deacetylase activity IEP Neighborhood
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Neighborhood
MF GO:0004636 phosphoribosyl-ATP diphosphatase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004725 protein tyrosine phosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006626 protein targeting to mitochondrion IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007112 male meiosis cytokinesis IEP Neighborhood
BP GO:0007127 meiosis I IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
BP GO:0007141 male meiosis I IEP Neighborhood
BP GO:0007143 female meiotic nuclear division IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0007276 gamete generation IEP Neighborhood
BP GO:0007349 cellularization IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
CC GO:0009368 endopeptidase Clp complex IEP Neighborhood
BP GO:0009405 pathogenesis IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009558 embryo sac cellularization IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009934 regulation of meristem structural organization IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010245 radial microtubular system formation IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016444 somatic cell DNA recombination IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
BP GO:0016925 protein sumoylation IEP Neighborhood
MF GO:0017005 3'-tyrosyl-DNA phosphodiesterase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018345 protein palmitoylation IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019211 phosphatase activator activity IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
MF GO:0019238 cyclohydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
MF GO:0030946 protein tyrosine phosphatase activity, metal-dependent IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0031312 extrinsic component of organelle membrane IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031386 protein tag IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033206 meiotic cytokinesis IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0033558 protein deacetylase activity IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042273 ribosomal large subunit biogenesis IEP Neighborhood
CC GO:0042406 extrinsic component of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048232 male gamete generation IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
MF GO:0051879 Hsp90 protein binding IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
MF GO:0070259 tyrosyl-DNA phosphodiesterase activity IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 53 92
IPR002589 Macro_dom 546 630
IPR032566 Znf-C2HE 838 892
No external refs found!