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  5. Pp3c8_3720V3.1

Pp3c8_3720V3.1


Description : nucleoporin 155


Gene families : OG0002234 (Archaeplastida) Phylogenetic Tree(s): OG0002234_tree ,
OG_05_0001971 (LandPlants) Phylogenetic Tree(s): OG_05_0001971_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_3720V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00130340 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
AT1G14850 NUP155 nucleoporin 155 0.09 Archaeplastida
Cpa|evm.model.tig00000789.44 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Cre09.g394350 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.06 Archaeplastida
GSVIVT01011661001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.07 Archaeplastida
GSVIVT01011662001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.06 Archaeplastida
Gb_24664 No alias NUP155 scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
LOC_Os06g20090.1 No alias NUP155 scaffold nucleoporin of nuclear pore complex 0.09 Archaeplastida
MA_10429005g0010 No alias NUP155 scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
MA_7653493g0010 No alias No annotation 0.03 Archaeplastida
Mp6g03580.1 No alias NUP155 scaffold nucleoporin of nuclear pore complex 0.06 Archaeplastida
Solyc07g008160.3.1 No alias NUP155 scaffold nucleoporin of nuclear pore complex 0.08 Archaeplastida
Zm00001e000883_P002 No alias NUP155 scaffold nucleoporin of nuclear pore complex 0.06 Archaeplastida
Zm00001e038690_P002 No alias NUP155 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!