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  5. Pp3c8_3890V3.1

Pp3c8_3890V3.1


Description : IKI3 family protein


Gene families : OG0006304 (Archaeplastida) Phylogenetic Tree(s): OG0006304_tree ,
OG_05_0007722 (LandPlants) Phylogenetic Tree(s): OG_05_0007722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_3890V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00082490 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
AT5G13680 ABO1, ELO2 IKI3 family protein 0.07 Archaeplastida
Cpa|evm.model.tig00000219.40 No alias Elongator complex protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre08.g372500 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
GSVIVT01016590001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Gb_20472 No alias component ELP1 of ELONGATOR transcription elongation complex 0.03 Archaeplastida
LOC_Os07g37640.1 No alias component ELP1 of ELONGATOR transcription elongation complex 0.08 Archaeplastida
MA_10434310g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9271465g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g09110.1 No alias component ELP1 of ELONGATOR transcription elongation complex 0.02 Archaeplastida
Smo235886 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc05g054630.4.1 No alias component ELP1 of ELONGATOR transcription elongation complex 0.04 Archaeplastida
Zm00001e008063_P001 No alias component ELP1 of ELONGATOR transcription elongation complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!