Pp3c8_3890V3.1


Description : IKI3 family protein


Gene families : OG0006304 (Archaeplastida) Phylogenetic Tree(s): OG0006304_tree ,
OG_05_0007722 (LandPlants) Phylogenetic Tree(s): OG_05_0007722_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_3890V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00082490 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
AT5G13680 ABO1, ELO2 IKI3 family protein 0.07 Archaeplastida
Cpa|evm.model.tig00000219.40 No alias Elongator complex protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre08.g372500 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
GSVIVT01016590001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Gb_20472 No alias component ELP1 of ELONGATOR transcription elongation complex 0.03 Archaeplastida
LOC_Os07g37640.1 No alias component ELP1 of ELONGATOR transcription elongation complex 0.08 Archaeplastida
MA_10434310g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9271465g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g09110.1 No alias component ELP1 of ELONGATOR transcription elongation complex 0.02 Archaeplastida
Smo235886 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc05g054630.4.1 No alias component ELP1 of ELONGATOR transcription elongation complex 0.04 Archaeplastida
Zm00001e008063_P001 No alias component ELP1 of ELONGATOR transcription elongation complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!