AT5G03680 (PTL)

Aliases : PTL

Description : Duplicated homeodomain-like superfamily protein

Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0008611 (SeedPlants) Phylogenetic Tree(s): OG_06_0008611_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G03680
Cluster	HCCA: Cluster_190

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00200990	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.Trihelix...	0.03	Archaeplastida
AT1G76880	No alias	Duplicated homeodomain-like superfamily protein	0.04	Archaeplastida
GSVIVT01033792001	No alias	RNA biosynthesis.transcriptional activation.Trihelix...	0.04	Archaeplastida
GSVIVT01034705001	No alias	RNA biosynthesis.transcriptional activation.Trihelix...	0.04	Archaeplastida
GSVIVT01035465001	No alias	RNA biosynthesis.transcriptional activation.Trihelix...	0.05	Archaeplastida
Gb_02053	No alias	transcription factor (Trihelix)	0.03	Archaeplastida
Gb_07284	No alias	transcription factor (Trihelix)	0.03	Archaeplastida
Gb_31300	No alias	transcription factor (Trihelix)	0.05	Archaeplastida
LOC_Os02g01380.1	No alias	transcription factor (Trihelix)	0.02	Archaeplastida
LOC_Os04g45750.1	No alias	transcription factor (Trihelix)	0.02	Archaeplastida
LOC_Os10g37240.4	No alias	Trihelix transcription factor GT-2 OS=Arabidopsis...	0.03	Archaeplastida
MA_10433499g0020	No alias	transcription factor (Trihelix)	0.02	Archaeplastida
MA_79619g0010	No alias	transcription factor (Trihelix)	0.04	Archaeplastida
Pp3c18_11190V3.1	No alias	Duplicated homeodomain-like superfamily protein	0.03	Archaeplastida
Solyc09g009250.3.1	No alias	transcription factor (Trihelix)	0.1	Archaeplastida
Zm00001e000092_P003	No alias	transcription factor (Trihelix)	0.04	Archaeplastida
Zm00001e012540_P001	No alias	transcription factor (Trihelix)	0.04	Archaeplastida
Zm00001e013403_P003	No alias	transcription factor (Trihelix)	0.03	Archaeplastida
Zm00001e025402_P001	No alias	transcription factor (Trihelix)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0007389	pattern specification process	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009798	axis specification	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009909	regulation of flower development	IMP	Interproscan
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010016	shoot system morphogenesis	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010200	response to chitin	IEP	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045926	negative regulation of growth	None	Extended
BP	GO:0046620	regulation of organ growth	None	Extended
BP	GO:0046621	negative regulation of organ growth	IMP	Interproscan
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048438	floral whorl development	RCA	Interproscan
BP	GO:0048439	flower morphogenesis	RCA	Interproscan
BP	GO:0048441	petal development	IMP	Interproscan
BP	GO:0048441	petal development	IGI	Interproscan
BP	GO:0048442	sepal development	IGI	Interproscan
BP	GO:0048449	floral organ formation	None	Extended
BP	GO:0048451	petal formation	RCA	Interproscan
BP	GO:0048453	sepal formation	RCA	Interproscan
BP	GO:0048498	establishment of petal orientation	IMP	Interproscan
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048519	negative regulation of biological process	RCA	Interproscan
BP	GO:0048559	establishment of floral organ orientation	None	Extended
BP	GO:0048560	establishment of anatomical structure orientation	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048640	negative regulation of developmental growth	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090428	perianth development	IMP	Interproscan
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0090707	establishment of plant organ orientation	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000082	G1/S transition of mitotic cell cycle	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
BP	GO:0001763	morphogenesis of a branching structure	IEP	Neighborhood
BP	GO:0002218	activation of innate immune response	IEP	Neighborhood
BP	GO:0002253	activation of immune response	IEP	Neighborhood
BP	GO:0002684	positive regulation of immune system process	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0009838	abscission	IEP	Neighborhood
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009954	proximal/distal pattern formation	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0010022	meristem determinacy	IEP	Neighborhood
BP	GO:0010052	guard cell differentiation	IEP	Neighborhood
BP	GO:0010065	primary meristem tissue development	IEP	Neighborhood
BP	GO:0010067	procambium histogenesis	IEP	Neighborhood
BP	GO:0010073	meristem maintenance	IEP	Neighborhood
BP	GO:0010076	maintenance of floral meristem identity	IEP	Neighborhood
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010094	specification of carpel identity	IEP	Neighborhood
BP	GO:0010197	polar nucleus fusion	IEP	Neighborhood
BP	GO:0010223	secondary shoot formation	IEP	Neighborhood
BP	GO:0010227	floral organ abscission	IEP	Neighborhood
BP	GO:0010229	inflorescence development	IEP	Neighborhood
BP	GO:0010252	auxin homeostasis	IEP	Neighborhood
BP	GO:0010254	nectary development	IEP	Neighborhood
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	Neighborhood
BP	GO:0010346	shoot axis formation	IEP	Neighborhood
BP	GO:0010434	bract formation	IEP	Neighborhood
BP	GO:0010582	floral meristem determinacy	IEP	Neighborhood
BP	GO:0010583	response to cyclopentenone	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
BP	GO:0031349	positive regulation of defense response	IEP	Neighborhood
BP	GO:0032504	multicellular organism reproduction	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0042802	identical protein binding	IEP	Neighborhood
MF	GO:0042803	protein homodimerization activity	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044770	cell cycle phase transition	IEP	Neighborhood
BP	GO:0044772	mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:0044843	cell cycle G1/S phase transition	IEP	Neighborhood
BP	GO:0045089	positive regulation of innate immune response	IEP	Neighborhood
MF	GO:0046982	protein heterodimerization activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0048446	petal morphogenesis	IEP	Neighborhood
BP	GO:0048467	gynoecium development	IEP	Neighborhood
BP	GO:0048479	style development	IEP	Neighborhood
BP	GO:0048480	stigma development	IEP	Neighborhood
BP	GO:0048508	embryonic meristem development	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0048584	positive regulation of response to stimulus	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048645	animal organ formation	IEP	Neighborhood
BP	GO:0050778	positive regulation of immune response	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0080006	internode patterning	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:2000603	regulation of secondary growth	IEP	Neighborhood
BP	GO:2000604	negative regulation of secondary growth	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G03680 (PTL)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation