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  5. Pp3s93_30V3.1

Pp3s93_30V3.1


Description : eukaryotic translation initiation factor 4A1


Gene families : OG0000822 (Archaeplastida) Phylogenetic Tree(s): OG0000822_tree ,
OG_05_0001711 (LandPlants) Phylogenetic Tree(s): OG_05_0001711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3s93_30V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00181640 evm_27.TU.AmTr_v1... Protein biosynthesis.translation initiation.mRNA... 0.05 Archaeplastida
AT1G54270 EIF4A-2 eif4a-2 0.02 Archaeplastida
AT3G13920 TIF4A1, EIF4A1, RH4 eukaryotic translation initiation factor 4A1 0.05 Archaeplastida
Cpa|evm.model.tig00001339.22 No alias RNA processing.RNA quality control Exon Junction complex... 0.01 Archaeplastida
Cre06.g298650 No alias Protein biosynthesis.translation initiation.mRNA... 0.02 Archaeplastida
GSVIVT01035374001 No alias Protein biosynthesis.translation initiation.mRNA... 0.04 Archaeplastida
GSVIVT01036113001 No alias Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia 0.04 Archaeplastida
Gb_05983 No alias mRNA unwinding factor (eIF4A) 0.03 Archaeplastida
MA_10436040g0020 No alias helicase component eIF4A3 of RNA quality control Exon... 0.02 Archaeplastida
Mp2g02760.1 No alias mRNA unwinding factor (eIF4A) 0.04 Archaeplastida
Pp3c5_28210V3.1 No alias eukaryotic translation initiation factor 4A1 0.03 Archaeplastida
Pp3c6_1080V3.1 No alias eukaryotic translation initiation factor 4A1 0.03 Archaeplastida
Solyc06g062800.4.1 No alias mRNA unwinding factor (eIF4A) 0.04 Archaeplastida
Solyc08g062800.3.1 No alias mRNA unwinding factor (eIF4A) 0.02 Archaeplastida
Solyc11g033280.2.1 No alias helicase component eIF4A3 of RNA quality control Exon... 0.06 Archaeplastida
Solyc12g095990.2.1 No alias mRNA unwinding factor (eIF4A) 0.04 Archaeplastida
Zm00001e013175_P002 No alias mRNA unwinding factor (eIF4A) 0.03 Archaeplastida
Zm00001e013648_P002 No alias mRNA unwinding factor (eIF4A) 0.03 Archaeplastida
Zm00001e016284_P001 No alias helicase component eIF4A3 of RNA quality control Exon... 0.06 Archaeplastida
Zm00001e023523_P001 No alias helicase component eIF4A3 of RNA quality control Exon... 0.02 Archaeplastida
Zm00001e030233_P004 No alias mRNA unwinding factor (eIF4A) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 65 226
IPR001650 Helicase_C 266 374
No external refs found!