AT5G04390

Description : C2H2-type zinc finger family protein

Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G04390
Cluster	HCCA: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00120810	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	Archaeplastida
AT5G61470	No alias	C2H2-like zinc finger protein	0.04	Archaeplastida
GSVIVT01023887001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	Archaeplastida
GSVIVT01037364001	No alias	Zinc finger protein ZAT2 OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_06484	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Gb_16414	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Gb_16419	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Gb_23552	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os02g44120.1	No alias	C2H2 zinc finger transcription factor	0.09	Archaeplastida
LOC_Os03g55540.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os04g08060.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os04g46670.1	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
LOC_Os05g02390.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os08g20580.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os10g40660.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_109421g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_19127g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_23050g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_922988g0010	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Solyc01g090830.2.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Solyc01g090840.3.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Solyc04g077980.1.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Solyc05g050860.2.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Solyc05g055500.1.1	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Solyc06g005180.1.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e001253_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e002344_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e005777_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e006181_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e028782_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e028784_P001	No alias	C2H2 zinc finger transcription factor	0.01	Archaeplastida
Zm00001e035423_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e038072_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e038074_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e041517_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e041518_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003785	actin monomer binding	IEP	Neighborhood
MF	GO:0003841	1-acylglycerol-3-phosphate O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005451	monovalent cation:proton antiporter activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
BP	GO:0006814	sodium ion transport	IEP	Neighborhood
BP	GO:0006885	regulation of pH	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007015	actin filament organization	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0010351	lithium ion transport	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015385	sodium:proton antiporter activity	IEP	Neighborhood
MF	GO:0015491	cation:cation antiporter activity	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
BP	GO:0015672	monovalent inorganic cation transport	IEP	Neighborhood
MF	GO:0016175	superoxide-generating NADPH oxidase activity	IEP	Neighborhood
CC	GO:0016324	apical plasma membrane	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030029	actin filament-based process	IEP	Neighborhood
BP	GO:0030036	actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
CC	GO:0030133	transport vesicle	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
CC	GO:0030427	site of polarized growth	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0035725	sodium ion transmembrane transport	IEP	Neighborhood
CC	GO:0035838	growing cell tip	IEP	Neighborhood
MF	GO:0042171	lysophosphatidic acid acyltransferase activity	IEP	Neighborhood
CC	GO:0042995	cell projection	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
CC	GO:0045177	apical part of cell	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0048868	pollen tube development	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0051017	actin filament bundle assembly	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
CC	GO:0051286	cell tip	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
BP	GO:0061572	actin filament bundle organization	IEP	Neighborhood
CC	GO:0070382	exocytic vesicle	IEP	Neighborhood
MF	GO:0071617	lysophospholipid acyltransferase activity	IEP	Neighborhood
CC	GO:0090404	pollen tube tip	IEP	Neighborhood
CC	GO:0090406	pollen tube	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0097435	supramolecular fiber organization	IEP	Neighborhood
CC	GO:0098590	plasma membrane region	IEP	Neighborhood
BP	GO:0098655	cation transmembrane transport	IEP	Neighborhood
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Neighborhood
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
CC	GO:0099503	secretory vesicle	IEP	Neighborhood
MF	GO:0099516	ion antiporter activity	IEP	Neighborhood
CC	GO:0120025	plasma membrane bounded cell projection	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G04390

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation