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Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 647.0)
Gene families : OG0108367 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0092059 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0072800 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_100606g0010 | |
| Cluster | HCCA: Cluster_197 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 304 | 337 |
| IPR002885 | Pentatricopeptide_repeat | 339 | 367 |
| IPR002885 | Pentatricopeptide_repeat | 107 | 143 |
| IPR002885 | Pentatricopeptide_repeat | 472 | 518 |
| IPR002885 | Pentatricopeptide_repeat | 370 | 418 |
| IPR002885 | Pentatricopeptide_repeat | 572 | 621 |
| IPR002885 | Pentatricopeptide_repeat | 239 | 287 |
| IPR032867 | DYW_dom | 746 | 870 |
| IPR002885 | Pentatricopeptide_repeat | 81 | 106 |
| IPR002885 | Pentatricopeptide_repeat | 182 | 208 |
| IPR002885 | Pentatricopeptide_repeat | 647 | 671 |
| No external refs found! |