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  5. MA_10372207g0010

MA_10372207g0010


Description : pectin methylesterase


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10372207g0010
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00071p00109420 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00044320 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.03 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.03 Archaeplastida
AT3G60730 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01035108001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Gb_03174 No alias pectin methylesterase 0.03 Archaeplastida
Gb_06356 No alias pectin methylesterase 0.03 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.03 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.03 Archaeplastida
Gb_24214 No alias pectin methylesterase 0.04 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.05 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os01g15039.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g57854.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os08g34900.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10377619g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_133919g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_354248g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_51464g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_84680g0010 No alias pectin methylesterase 0.03 Archaeplastida
Mp8g00060.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.04 Archaeplastida
Pp3c18_22120V3.1 No alias pectin methylesterase PCR fragment F 0.02 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Smo154356 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e009863_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e034231_P001 No alias pectin methylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 55 192
IPR000070 Pectinesterase_cat 251 549
No external refs found!