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  5. MA_103893g0010

MA_103893g0010


Description : 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana (sp|q84p21|4cll5_arath : 423.0)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0000459 (LandPlants) Phylogenetic Tree(s): OG_05_0000459_tree ,
OG_06_0000725 (SeedPlants) Phylogenetic Tree(s): OG_06_0000725_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_103893g0010
Cluster HCCA: Cluster_389

Target Alias Description ECC score Gene Family Method Actions
Pp3c21_15460V3.1 No alias 4-coumarate:CoA ligase 3 0.01 Archaeplastida
Pp3c3_24370V3.1 No alias AMP-dependent synthetase and ligase family protein 0.01 Archaeplastida
Smo429785 No alias 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
Solyc03g097030.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Solyc07g008360.2.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
Zm00001e002498_P003 No alias 4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Zm00001e008138_P001 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 40 401
No external refs found!