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  5. MA_10428405g0010

MA_10428405g0010


Description : subunit alpha of coat protein complex


Gene families : OG0002801 (Archaeplastida) Phylogenetic Tree(s): OG0002801_tree ,
OG_05_0002931 (LandPlants) Phylogenetic Tree(s): OG_05_0002931_tree ,
OG_06_0003184 (SeedPlants) Phylogenetic Tree(s): OG_06_0003184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428405g0010
Cluster HCCA: Cluster_409

Target Alias Description ECC score Gene Family Method Actions
AT1G62020 No alias Coatomer, alpha subunit 0.06 Archaeplastida
AT2G21390 No alias Coatomer, alpha subunit 0.06 Archaeplastida
Cpa|evm.model.tig00000144.152 No alias Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre13.g565850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 Archaeplastida
GSVIVT01009813001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
Gb_09624 No alias subunit alpha of coat protein complex 0.05 Archaeplastida
Gb_15817 No alias subunit alpha of coat protein complex 0.07 Archaeplastida
LOC_Os03g50340.1 No alias subunit alpha of coat protein complex 0.06 Archaeplastida
LOC_Os03g50350.1 No alias subunit alpha of coat protein complex 0.1 Archaeplastida
LOC_Os09g04110.1 No alias subunit alpha of coat protein complex 0.08 Archaeplastida
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.06 Archaeplastida
Pp3c11_12600V3.1 No alias Coatomer, alpha subunit 0.03 Archaeplastida
Pp3c1_12990V3.1 No alias Coatomer, alpha subunit 0.07 Archaeplastida
Pp3c2_24120V3.1 No alias Coatomer, alpha subunit 0.04 Archaeplastida
Smo77651 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Smo85610 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Solyc04g080980.2.1 No alias subunit alpha of coat protein complex 0.07 Archaeplastida
Solyc07g032100.3.1 No alias subunit alpha of coat protein complex 0.05 Archaeplastida
Zm00001e005441_P001 No alias subunit alpha of coat protein complex 0.1 Archaeplastida
Zm00001e012192_P001 No alias subunit alpha of coat protein complex 0.1 Archaeplastida
Zm00001e016505_P002 No alias subunit alpha of coat protein complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006692 Coatomer_WD-assoc_reg 301 729
IPR001680 WD40_repeat 87 124
IPR001680 WD40_repeat 4 40
IPR001680 WD40_repeat 202 237
IPR001680 WD40_repeat 44 82
IPR001680 WD40_repeat 159 192
IPR010714 Coatomer_asu_C 776 1175
No external refs found!