MA_10429367g0010

Description : DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana (sp|f4ilr7|dexh1_arath : 432.0)

Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree ,
OG_05_0000862 (LandPlants) Phylogenetic Tree(s): OG_05_0000862_tree ,
OG_06_0000964 (SeedPlants) Phylogenetic Tree(s): OG_06_0000964_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10429367g0010
Cluster	HCCA: Cluster_536

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00230510	evm_27.TU.AmTr_v1...	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic...	0.02	Archaeplastida
AMTR_s00028p00237040	evm_27.TU.AmTr_v1...	DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT1G06670	NIH	nuclear DEIH-boxhelicase	0.05	Archaeplastida
AT1G58060	No alias	RNA helicase family protein	0.02	Archaeplastida
AT5G04895	No alias	DEA(D/H)-box RNA helicase family protein	0.03	Archaeplastida
Cre12.g492450	No alias	DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01020822001	No alias	DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01023271001	No alias	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic...	0.02	Archaeplastida
Gb_13707	No alias	DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis...	0.03	Archaeplastida
Gb_40990	No alias	DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os03g53760.1	No alias	DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os04g35260.1	No alias	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic...	0.03	Archaeplastida
Mp5g09990.1	No alias	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic...	0.02	Archaeplastida
Pp3c11_11920V3.1	No alias	RNA helicase family protein	0.02	Archaeplastida
Pp3c14_12310V3.1	No alias	RNA helicase family protein	0.02	Archaeplastida
Solyc01g006970.4.1	No alias	DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis...	0.03	Archaeplastida
Zm00001e004608_P001	No alias	DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003697	single-stranded DNA binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Neighborhood
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005096	GTPase activator activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Neighborhood
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006497	protein lipidation	IEP	Neighborhood
BP	GO:0006505	GPI anchor metabolic process	IEP	Neighborhood
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Neighborhood
BP	GO:0006643	membrane lipid metabolic process	IEP	Neighborhood
BP	GO:0006644	phospholipid metabolic process	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Neighborhood
BP	GO:0006664	glycolipid metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0009247	glycolipid biosynthetic process	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
CC	GO:0017053	transcriptional repressor complex	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
MF	GO:0031369	translation initiation factor binding	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Neighborhood
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Neighborhood
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1903509	liposaccharide metabolic process	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	2	69
IPR011709	DUF1605	147	227

External Links

No external refs found!

MA_10429367g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation