AT5G13380

Description : Auxin-responsive GH3 family protein

Gene families : OG0000138 (Archaeplastida) Phylogenetic Tree(s): OG0000138_tree ,
OG_05_0000189 (LandPlants) Phylogenetic Tree(s): OG_05_0000189_tree ,
OG_06_0016950 (SeedPlants) Phylogenetic Tree(s): OG_06_0016950_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G13380
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00043p00208540	evm_27.TU.AmTr_v1...	Phytohormones.auxin.conjugation and...	0.04	Archaeplastida
AT1G23160	No alias	Auxin-responsive GH3 family protein	0.04	Archaeplastida
AT1G28130	GH3.17	Auxin-responsive GH3 family protein	0.07	Archaeplastida
AT2G23170	GH3.3	Auxin-responsive GH3 family protein	0.06	Archaeplastida
AT5G13320	GH3.12, PBS3, WIN3, GDG1	Auxin-responsive GH3 family protein	0.04	Archaeplastida
AT5G51470	No alias	Auxin-responsive GH3 family protein	0.04	Archaeplastida
AT5G54510	DFL1, GH3.6	Auxin-responsive GH3 family protein	0.04	Archaeplastida
GSVIVT01014545001	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.03	Archaeplastida
GSVIVT01027971001	No alias	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.07	Archaeplastida
Gb_04369	No alias	indole-3-acetic acid-amido synthetase	0.04	Archaeplastida
Gb_06148	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.03	Archaeplastida
Gb_09499	No alias	indole-3-acetic acid-amido synthetase	0.02	Archaeplastida
Gb_14667	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Gb_36596	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	Archaeplastida
LOC_Os01g55940.1	No alias	indole-3-acetic acid-amido synthetase	0.02	Archaeplastida
LOC_Os11g08340.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.12...	0.04	Archaeplastida
LOC_Os11g32510.1	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.05	Archaeplastida
LOC_Os11g32520.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.13...	0.03	Archaeplastida
MA_10432413g0020	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.02	Archaeplastida
MA_10434772g0010	No alias	indole-3-acetic acid-amido synthetase	0.03	Archaeplastida
MA_212507g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_393345g0010	No alias	Probable indole-3-acetic acid-amido synthetase GH3.1...	0.04	Archaeplastida
Mp6g07600.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.8...	0.02	Archaeplastida
Pp3c24_16260V3.1	No alias	Auxin-responsive GH3 family protein	0.02	Archaeplastida
Smo110439	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.04	Archaeplastida
Smo125443	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.05	Archaeplastida
Smo425963	No alias	Jasmonic acid-amido synthetase JAR1 OS=Oryza sativa...	0.02	Archaeplastida
Solyc00g500214.1.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Solyc00g500218.1.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Solyc00g500285.1.1	No alias	no description available(sp\|a0a314ksq4\|jar6_nicat : 231.0)	0.03	Archaeplastida
Solyc06g048710.2.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Solyc10g006630.3.1	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.03	Archaeplastida
Solyc10g009610.2.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Zm00001e002049_P001	No alias	Probable indole-3-acetic acid-amido synthetase GH3.8...	0.04	Archaeplastida
Zm00001e011159_P002	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	Archaeplastida
Zm00001e016438_P001	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010584	pollen exine formation	RCA	Interproscan
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Neighborhood
MF	GO:0003747	translation release factor activity	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005788	endoplasmic reticulum lumen	IEP	Neighborhood
BP	GO:0006415	translational termination	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008079	translation termination factor activity	IEP	Neighborhood
BP	GO:0008216	spermidine metabolic process	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0008300	isoprenoid catabolic process	IEP	Neighborhood
BP	GO:0009555	pollen development	IEP	Neighborhood
BP	GO:0009556	microsporogenesis	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0009943	adaxial/abaxial axis specification	IEP	Neighborhood
BP	GO:0010152	pollen maturation	IEP	Neighborhood
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEP	Neighborhood
MF	GO:0015271	outward rectifier potassium channel activity	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
BP	GO:0016103	diterpenoid catabolic process	IEP	Neighborhood
BP	GO:0016115	terpenoid catabolic process	IEP	Neighborhood
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016621	cinnamoyl-CoA reductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
MF	GO:0018685	alkane 1-monooxygenase activity	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
BP	GO:0030638	polyketide metabolic process	IEP	Neighborhood
BP	GO:0030639	polyketide biosynthetic process	IEP	Neighborhood
MF	GO:0031956	medium-chain fatty acid-CoA ligase activity	IEP	Neighborhood
BP	GO:0032984	protein-containing complex disassembly	IEP	Neighborhood
BP	GO:0034293	sexual sporulation	IEP	Neighborhood
BP	GO:0035337	fatty-acyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0035384	thioester biosynthetic process	IEP	Neighborhood
BP	GO:0035445	borate transmembrane transport	IEP	Neighborhood
BP	GO:0042335	cuticle development	IEP	Neighborhood
MF	GO:0042409	caffeoyl-CoA O-methyltransferase activity	IEP	Neighborhood
BP	GO:0042447	hormone catabolic process	IEP	Neighborhood
BP	GO:0043624	cellular protein complex disassembly	IEP	Neighborhood
BP	GO:0043934	sporulation	IEP	Neighborhood
BP	GO:0045487	gibberellin catabolic process	IEP	Neighborhood
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	Neighborhood
BP	GO:0046713	borate transport	IEP	Neighborhood
MF	GO:0046715	active borate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0046949	fatty-acyl-CoA biosynthetic process	IEP	Neighborhood
BP	GO:0048229	gametophyte development	IEP	Neighborhood
BP	GO:0048236	plant-type sporogenesis	IEP	Neighborhood
BP	GO:0048658	anther wall tapetum development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0048859	formation of anatomical boundary	IEP	Neighborhood
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	Neighborhood
BP	GO:0051321	meiotic cell cycle	IEP	Neighborhood
BP	GO:0051791	medium-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0051792	medium-chain fatty acid biosynthetic process	IEP	Neighborhood
MF	GO:0052634	C-19 gibberellin 2-beta-dioxygenase activity	IEP	Neighborhood
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	Neighborhood
MF	GO:0072532	tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity	IEP	Neighborhood
MF	GO:0072533	tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity	IEP	Neighborhood
MF	GO:0072547	tricoumaroylspermidine meta-hydroxylase activity	IEP	Neighborhood
MF	GO:0072548	dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity	IEP	Neighborhood
MF	GO:0072549	monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity	IEP	Neighborhood
MF	GO:0072550	triferuloylspermidine meta-hydroxylase activity	IEP	Neighborhood
MF	GO:0072551	diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity	IEP	Neighborhood
MF	GO:0072552	monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity	IEP	Neighborhood
MF	GO:0080012	trihydroxyferuloyl spermidine O-methyltransferase activity	IEP	Neighborhood
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Neighborhood
MF	GO:0080030	methyl indole-3-acetate esterase activity	IEP	Neighborhood
MF	GO:0080072	spermidine:sinapoyl CoA N-acyltransferase activity	IEP	Neighborhood
MF	GO:0080073	spermidine:coumaroyl CoA N-acyltransferase activity	IEP	Neighborhood
MF	GO:0080074	spermidine:caffeoyl CoA N-acyltransferase activity	IEP	Neighborhood
MF	GO:0080075	spermidine:feruloyl CoA N-acyltransferase activity	IEP	Neighborhood
MF	GO:0080076	caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity	IEP	Neighborhood
MF	GO:0080077	trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity	IEP	Neighborhood
MF	GO:0080078	tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity	IEP	Neighborhood
BP	GO:0080088	spermidine hydroxycinnamate conjugate biosynthetic process	IEP	Neighborhood
BP	GO:0080110	sporopollenin biosynthetic process	IEP	Neighborhood
MF	GO:0090439	tetraketide alpha-pyrone synthase activity	IEP	Neighborhood
BP	GO:0090691	formation of plant organ boundary	IEP	Neighborhood
BP	GO:0098661	inorganic anion transmembrane transport	IEP	Neighborhood
BP	GO:1900150	regulation of defense response to fungus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004993	GH3	47	593

External Links

No external refs found!

AT5G13380

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation