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  5. MA_10429859g0010

MA_10429859g0010


Description : exo-/endoribonuclease (RNase J)


Gene families : OG0006288 (Archaeplastida) Phylogenetic Tree(s): OG0006288_tree ,
OG_05_0005831 (LandPlants) Phylogenetic Tree(s): OG_05_0005831_tree ,
OG_06_0005199 (SeedPlants) Phylogenetic Tree(s): OG_06_0005199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429859g0010
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.06 Archaeplastida
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.1 Archaeplastida
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.05 Archaeplastida
Gb_26634 No alias exo-/endoribonuclease (RNase J) 0.05 Archaeplastida
Gb_29169 No alias exo-/endoribonuclease (RNase J) 0.05 Archaeplastida
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.03 Archaeplastida
Mp3g10830.1 No alias exo-/endoribonuclease (RNase J) 0.05 Archaeplastida
Pp3c20_9790V3.1 No alias RNA-metabolising metallo-beta-lactamase family protein 0.05 Archaeplastida
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.05 Archaeplastida
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.08 Archaeplastida
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!