MA_10429866g0030

Description : 60S ribosomal protein L23 OS=Arabidopsis thaliana (sp|p49690|rl23_arath : 85.1)

Gene families : OG0001339 (Archaeplastida) Phylogenetic Tree(s): OG0001339_tree ,
OG_05_0095256 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0076410 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10429866g0030
Cluster	HCCA: Cluster_261

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00206470	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	Archaeplastida
AT1G04480	No alias	Ribosomal protein L14p/L23e family protein	0.06	Archaeplastida
AT2G33370	No alias	Ribosomal protein L14p/L23e family protein	0.05	Archaeplastida
AT3G04400	emb2171	Ribosomal protein L14p/L23e family protein	0.06	Archaeplastida
Cpa\|evm.model.tig00021290.9	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	Archaeplastida
Cre04.g211800	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	Archaeplastida
GSVIVT01028407001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	Archaeplastida
LOC_Os02g56960.1	No alias	component RPL23 of LSU proteome component	0.05	Archaeplastida
LOC_Os03g04590.1	No alias	component RPL23 of LSU proteome component	0.04	Archaeplastida
LOC_Os10g32920.1	No alias	component RPL23 of LSU proteome component	0.05	Archaeplastida
MA_10432200g0010	No alias	component RPL23 of LSU proteome component	0.05	Archaeplastida
Pp3c16_13640V3.1	No alias	Ribosomal protein L14p/L23e family protein	0.03	Archaeplastida
Pp3c24_8570V3.1	No alias	Ribosomal protein L14p/L23e family protein	0.02	Archaeplastida
Pp3c27_860V3.1	No alias	Ribosomal protein L14p/L23e family protein	0.02	Archaeplastida
Pp3c8_12080V3.1	No alias	Ribosomal protein L14p/L23e family protein	0.02	Archaeplastida
Pp3c8_16130V3.1	No alias	Ribosomal protein L14p/L23e family protein	0.01	Archaeplastida
Smo165708	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	Archaeplastida
Solyc06g008170.3.1	No alias	component RPL23 of LSU proteome component	0.04	Archaeplastida
Solyc06g083780.3.1	No alias	component RPL23 of LSU proteome component	0.04	Archaeplastida
Solyc09g072865.1.1	No alias	component RPL23 of LSU proteome component	0.03	Archaeplastida
Solyc09g090610.3.1	No alias	component RPL23 of LSU proteome component	0.02	Archaeplastida
Zm00001e000323_P001	No alias	component RPL23 of LSU proteome component	0.04	Archaeplastida
Zm00001e012721_P001	No alias	component RPL23 of LSU proteome component	0.02	Archaeplastida
Zm00001e023614_P001	No alias	component RPL23 of LSU proteome component	0.03	Archaeplastida
Zm00001e038953_P001	No alias	component RPL23 of LSU proteome component	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Neighborhood
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
CC	GO:0005787	signal peptidase complex	IEP	Neighborhood
CC	GO:0005839	proteasome core complex	IEP	Neighborhood
BP	GO:0006465	signal peptide processing	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006528	asparagine metabolic process	IEP	Neighborhood
BP	GO:0006529	asparagine biosynthetic process	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0045048	protein insertion into ER membrane	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0051205	protein insertion into membrane	IEP	Neighborhood
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Neighborhood
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
MF	GO:0070003	threonine-type peptidase activity	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000218	Ribosomal_L14P	56	97

External Links

No external refs found!

MA_10429866g0030

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation