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MA_10436543g0020


Description : EBF-type ethylene signal transducer. component EBF of SCF E3 ubiquitin ligase complex


Gene families : OG0002999 (Archaeplastida) Phylogenetic Tree(s): OG0002999_tree ,
OG_05_0002473 (LandPlants) Phylogenetic Tree(s): OG_05_0002473_tree ,
OG_06_0002450 (SeedPlants) Phylogenetic Tree(s): OG_06_0002450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436543g0020
Cluster HCCA: Cluster_405

Target Alias Description ECC score Gene Family Method Actions
AT5G25350 EBF2 EIN3-binding F box protein 2 0.07 Archaeplastida
Pp3c12_11790V3.1 No alias EIN3-binding F box protein 1 0.03 Archaeplastida
Solyc12g009560.2.1 No alias EBF-type ethylene signal transducer. component EBF of... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 355 377
IPR001611 Leu-rich_rpt 223 246
IPR001611 Leu-rich_rpt 464 483
IPR001611 Leu-rich_rpt 544 562
IPR011545 DEAD/DEAH_box_helicase_dom 620 679
No external refs found!