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  5. MA_10436772g0010

MA_10436772g0010


Description : chaperone (Hsp60)


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0002717 (LandPlants) Phylogenetic Tree(s): OG_05_0002717_tree ,
OG_06_0003050 (SeedPlants) Phylogenetic Tree(s): OG_06_0003050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436772g0010
Cluster HCCA: Cluster_408

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00080200 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.03 Archaeplastida
AMTR_s00062p00185880 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.04 Archaeplastida
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.03 Archaeplastida
AT3G13470 No alias TCP-1/cpn60 chaperonin family protein 0.02 Archaeplastida
Cpa|evm.model.tig00001269.7 No alias External stimuli response.temperature.Hsp... 0.01 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre06.g309100 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.01 Archaeplastida
GSVIVT01012098001 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
GSVIVT01025490001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01031526001 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Gb_25193 No alias RuBisCO large subunit-binding protein subunit beta,... 0.02 Archaeplastida
LOC_Os06g02380.2 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
LOC_Os09g38980.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
LOC_Os12g17910.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Pp3c16_4660V3.1 No alias chaperonin 60 beta 0.03 Archaeplastida
Pp3c24_12180V3.1 No alias chaperonin-60alpha 0.04 Archaeplastida
Pp3c26_2180V3.1 No alias heat shock protein 60 0.02 Archaeplastida
Pp3c27_5110V3.1 No alias chaperonin 60 beta 0.03 Archaeplastida
Pp3c4_22500V3.1 No alias heat shock protein 60 0.05 Archaeplastida
Pp3c8_16290V3.1 No alias chaperonin-60alpha 0.03 Archaeplastida
Smo168153 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Smo405358 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
Solyc01g028810.3.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.08 Archaeplastida
Solyc05g010240.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Solyc09g091180.3.1 No alias chaperone (Hsp60) 0.03 Archaeplastida
Solyc11g069790.2.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.07 Archaeplastida
Zm00001e012733_P002 No alias chaperone (Hsp60) 0.03 Archaeplastida
Zm00001e029825_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Zm00001e036666_P003 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0035658 Mon1-Ccz1 complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 81 538
No external refs found!