Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_10437227g0020 | |
Cluster | HCCA: Cluster_342 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00039p00186640 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
AT2G02720 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT3G24230 | No alias | Pectate lyase family protein | 0.04 | Archaeplastida | |
AT3G24670 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT4G22090 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01014682001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
GSVIVT01024239001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
GSVIVT01028548001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
LOC_Os10g31910.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
MA_101171g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_10205415g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_103716g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_10426822g0020 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_10428603g0020 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_10430145g0020 | No alias | pectate lyase | 0.04 | Archaeplastida | |
MA_10430145g0030 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_1164682g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_170547g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_474372g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
MA_91467g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_91467g0020 | No alias | pectate lyase | 0.04 | Archaeplastida | |
MA_928735g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
MA_97947g0010 | No alias | pectate lyase | 0.04 | Archaeplastida | |
Mp8g00770.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c1_33130V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c1_4040V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c21_16990V3.1 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
Pp3c22_19760V3.1 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
Pp3c22_19780V3.1 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
Zm00001e008755_P002 | No alias | pectate lyase | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
MF | GO:0004743 | pyruvate kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Neighborhood |
BP | GO:0006721 | terpenoid metabolic process | IEP | Neighborhood |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Neighborhood |
BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Neighborhood |
MF | GO:0010333 | terpene synthase activity | IEP | Neighborhood |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Neighborhood |
MF | GO:0016410 | N-acyltransferase activity | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016744 | transferase activity, transferring aldehyde or ketonic groups | IEP | Neighborhood |
MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
MF | GO:0016829 | lyase activity | IEP | Neighborhood |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Neighborhood |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Neighborhood |
MF | GO:0030955 | potassium ion binding | IEP | Neighborhood |
MF | GO:0031420 | alkali metal ion binding | IEP | Neighborhood |
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 152 | 337 |
No external refs found! |