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  5. MA_10689g0010

MA_10689g0010


Description : PHD finger transcription factor


Gene families : OG0003118 (Archaeplastida) Phylogenetic Tree(s): OG0003118_tree ,
OG_05_0002467 (LandPlants) Phylogenetic Tree(s): OG_05_0002467_tree ,
OG_06_0002003 (SeedPlants) Phylogenetic Tree(s): OG_06_0002003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10689g0010
Cluster HCCA: Cluster_478

Target Alias Description ECC score Gene Family Method Actions
AT5G12400 No alias DNA binding;zinc ion binding;DNA binding 0.05 Archaeplastida
AT5G35210 No alias metalloendopeptidases;zinc ion binding;DNA binding 0.05 Archaeplastida
GSVIVT01031411001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 Archaeplastida
GSVIVT01037231001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 Archaeplastida
Gb_21810 No alias PHD finger transcription factor 0.03 Archaeplastida
LOC_Os11g05130.1 No alias PHD finger transcription factor 0.04 Archaeplastida
Mp4g03480.1 No alias PHD finger transcription factor 0.02 Archaeplastida
Pp3c7_5480V3.1 No alias metalloendopeptidases;zinc ion binding;DNA binding 0.02 Archaeplastida
Smo441144 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
Solyc11g065160.3.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc11g066780.3.1 No alias PHD finger transcription factor 0.05 Archaeplastida
Zm00001e009150_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e035778_P001 No alias PHD finger transcription factor 0.05 Archaeplastida
Zm00001e039352_P001 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR018501 DDT_dom 293 349
IPR028942 WHIM1_dom 407 441
IPR019787 Znf_PHD-finger 544 586
No external refs found!