Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT5G22720.2); Has 65 Blast hits to 64 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G22680 | |
Cluster | HCCA: Cluster_56 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G32020 | No alias | F-box family protein | 0.03 | Archaeplastida | |
AT1G60400 | No alias | F-box/RNI-like superfamily protein | 0.03 | Archaeplastida | |
AT1G66290 | No alias | F-box/RNI-like superfamily protein | 0.03 | Archaeplastida | |
AT1G66320 | No alias | F-box/RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT1G66640 | No alias | RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT1G78750 | No alias | F-box/RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT5G22590 | No alias | Leucine Rich Repeat protein family | 0.04 | Archaeplastida | |
AT5G22660 | No alias | FBD, F-box, Skp2-like and Leucine Rich Repeat domains... | 0.04 | Archaeplastida | |
AT5G22670 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.05 | Archaeplastida | |
AT5G25850 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.03 | Archaeplastida | |
AT5G44940 | No alias | F-box/RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT5G44950 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.04 | Archaeplastida | |
AT5G44970 | No alias | Protein with RNI-like/FBD-like domains | 0.04 | Archaeplastida | |
AT5G44980 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.04 | Archaeplastida | |
AT5G53635 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
CC | GO:0005851 | eukaryotic translation initiation factor 2B complex | IEP | Neighborhood |
BP | GO:0006446 | regulation of translational initiation | IEP | Neighborhood |
BP | GO:0007065 | male meiosis sister chromatid cohesion | IEP | Neighborhood |
BP | GO:0007066 | female meiosis sister chromatid cohesion | IEP | Neighborhood |
BP | GO:0009704 | de-etiolation | IEP | Neighborhood |
BP | GO:0009733 | response to auxin | IEP | Neighborhood |
BP | GO:0017148 | negative regulation of translation | IEP | Neighborhood |
BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0045947 | negative regulation of translational initiation | IEP | Neighborhood |
BP | GO:0051177 | meiotic sister chromatid cohesion | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |