AT5G25160 (ZFP3)

Aliases : ZFP3

Description : zinc finger protein 3

Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0002182 (SeedPlants) Phylogenetic Tree(s): OG_06_0002182_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G25160
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00139230	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00024p00186840	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.02	Archaeplastida
AMTR_s00039p00193810	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.02	Archaeplastida
AMTR_s00057p00086480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	Archaeplastida
AMTR_s00079p00109960	evm_27.TU.AmTr_v1...	Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica	0.02	Archaeplastida
AMTR_s00079p00169240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	Archaeplastida
AMTR_s00088p00145510	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.06	Archaeplastida
AMTR_s00124p00105750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	Archaeplastida
AT1G13400	JGL, NUB	C2H2 and C2HC zinc fingers superfamily protein	0.03	Archaeplastida
AT1G24625	ZFP7	zinc finger protein 7	0.03	Archaeplastida
AT1G66140	ZFP4	zinc finger protein 4	0.03	Archaeplastida
AT3G23130	SUP, FLO10, FON1	C2H2 and C2HC zinc fingers superfamily protein	0.05	Archaeplastida
AT3G53820	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.06	Archaeplastida
AT5G57520	ATZFP2, ZFP2	zinc finger protein 2	0.06	Archaeplastida
GSVIVT01011868001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.06	Archaeplastida
GSVIVT01011890001	No alias	Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica	0.02	Archaeplastida
GSVIVT01013168001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	Archaeplastida
GSVIVT01016493001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.09	Archaeplastida
GSVIVT01025803001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.02	Archaeplastida
GSVIVT01027719001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.02	Archaeplastida
GSVIVT01031007001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.08	Archaeplastida
Gb_04808	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_07777	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Gb_27734	No alias	Zinc finger protein 10 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g04120.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os01g32920.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os03g05490.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os03g41110.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os04g50070.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os05g14130.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os05g20930.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
LOC_Os07g01180.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os08g44190.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os09g26200.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os09g26210.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os09g27320.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
LOC_Os09g38610.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os11g48000.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_10430024g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_113057g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_121523g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_123573g0010	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
MA_2800g0010	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
MA_357706g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_424g0010	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
MA_54742g0010	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
MA_57615g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Mp3g23440.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Pp3c1_8210V3.1	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.02	Archaeplastida
Pp3c20_10790V3.1	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.02	Archaeplastida
Pp3c23_2190V3.1	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.03	Archaeplastida
Pp3c23_800V3.1	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.02	Archaeplastida
Pp3c23_960V3.1	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.03	Archaeplastida
Pp3c26_13140V3.1	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.02	Archaeplastida
Solyc01g107430.2.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Solyc03g117070.1.1	No alias	C2H2 zinc finger transcription factor	0.09	Archaeplastida
Solyc05g006310.3.1	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Solyc05g009170.3.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Solyc05g009180.1.1	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Solyc09g011120.1.1	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Solyc09g066250.1.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc10g078970.1.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Solyc10g078990.1.1	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Solyc10g084910.3.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc11g011890.2.1	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Zm00001e000996_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e008019_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e009854_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e011910_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e012453_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e013845_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e016256_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e017009_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e020926_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e022212_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e025746_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e032639_P001	No alias	C2H2 zinc finger transcription factor	0.07	Archaeplastida
Zm00001e034219_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e034220_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e034221_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e034223_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e034883_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e035448_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e036816_P001	No alias	C2H2 zinc finger transcription factor	0.09	Archaeplastida
Zm00001e037944_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e040612_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e040940_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003680	AT DNA binding	IEP	Neighborhood
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	Neighborhood
MF	GO:0004064	arylesterase activity	IEP	Neighborhood
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005242	inward rectifier potassium channel activity	IEP	Neighborhood
MF	GO:0005244	voltage-gated ion channel activity	IEP	Neighborhood
MF	GO:0005249	voltage-gated potassium channel activity	IEP	Neighborhood
MF	GO:0005261	cation channel activity	IEP	Neighborhood
MF	GO:0005267	potassium channel activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006598	polyamine catabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006857	oligopeptide transport	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009310	amine catabolic process	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009624	response to nematode	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
BP	GO:0009691	cytokinin biosynthetic process	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009734	auxin-activated signaling pathway	IEP	Neighborhood
BP	GO:0009751	response to salicylic acid	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010107	potassium ion import	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
BP	GO:0010232	vascular transport	IEP	Neighborhood
BP	GO:0010233	phloem transport	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
BP	GO:0010345	suberin biosynthetic process	IEP	Neighborhood
BP	GO:0010359	regulation of anion channel activity	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0016098	monoterpenoid metabolic process	IEP	Neighborhood
BP	GO:0016099	monoterpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
BP	GO:0019722	calcium-mediated signaling	IEP	Neighborhood
BP	GO:0019932	second-messenger-mediated signaling	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022832	voltage-gated channel activity	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
MF	GO:0022843	voltage-gated cation channel activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0030551	cyclic nucleotide binding	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0032409	regulation of transporter activity	IEP	Neighborhood
BP	GO:0032412	regulation of ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034762	regulation of transmembrane transport	IEP	Neighborhood
BP	GO:0034765	regulation of ion transmembrane transport	IEP	Neighborhood
MF	GO:0034768	(E)-beta-ocimene synthase activity	IEP	Neighborhood
BP	GO:0040034	regulation of development, heterochronic	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044070	regulation of anion transport	IEP	Neighborhood
MF	GO:0045431	flavonol synthase activity	IEP	Neighborhood
BP	GO:0045489	pectin biosynthetic process	IEP	Neighborhood
MF	GO:0047617	acyl-CoA hydrolase activity	IEP	Neighborhood
BP	GO:0048364	root development	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	Neighborhood
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	Neighborhood
BP	GO:0048527	lateral root development	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
MF	GO:0050551	myrcene synthase activity	IEP	Neighborhood
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0052325	cell wall pectin biosynthetic process	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood
BP	GO:0090333	regulation of stomatal closure	IEP	Neighborhood
BP	GO:0090408	phloem nitrate loading	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood
MF	GO:0099094	ligand-gated cation channel activity	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:1903959	regulation of anion transmembrane transport	IEP	Neighborhood
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Neighborhood
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G25160 (ZFP3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation