AT5G25560


Description : CHY-type/CTCHY-type/RING-type Zinc finger protein


Gene families : OG0001478 (Archaeplastida) Phylogenetic Tree(s): OG0001478_tree ,
OG_05_0001122 (LandPlants) Phylogenetic Tree(s): OG_05_0001122_tree ,
OG_06_0000963 (SeedPlants) Phylogenetic Tree(s): OG_06_0000963_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25560
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020603.34 No alias Zinc finger protein BRUTUS-like At1g74770 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP Neighborhood
MF GO:0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005778 peroxisomal membrane IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006491 N-glycan processing IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
CC GO:0010008 endosome membrane IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0016004 phospholipase activator activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016262 protein N-acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031903 microbody membrane IEP Neighborhood
CC GO:0035061 interchromatin granule IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
MF GO:0060229 lipase activator activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0070878 primary miRNA binding IEP Neighborhood
MF GO:0070883 pre-miRNA binding IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR008913 Znf_CHY 63 144
IPR001841 Znf_RING 198 241
No external refs found!