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  5. AT5G26260

AT5G26260


Description : TRAF-like family protein


Gene families : OG0004283 (Archaeplastida) Phylogenetic Tree(s): OG0004283_tree ,
OG_05_0002958 (LandPlants) Phylogenetic Tree(s): OG_05_0002958_tree ,
OG_06_0001776 (SeedPlants) Phylogenetic Tree(s): OG_06_0001776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G26260
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT3G17380 No alias TRAF-like family protein 0.04 Archaeplastida
AT3G20380 No alias TRAF-like family protein 0.07 Archaeplastida
AT3G28220 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G46190 No alias TRAF-like family protein 0.02 Archaeplastida
AT4G09780 No alias TRAF-like family protein 0.04 Archaeplastida
AT5G26320 No alias TRAF-like family protein 0.06 Archaeplastida
GSVIVT01037800001 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01037804001 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004151 dihydroorotase activity IEP Neighborhood
MF GO:0004163 diphosphomevalonate decarboxylase activity IEP Neighborhood
MF GO:0004452 isopentenyl-diphosphate delta-isomerase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004737 pyruvate decarboxylase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006085 acetyl-CoA biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008825 cyclopropane-fatty-acyl-phospholipid synthase activity IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009635 response to herbicide IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010029 regulation of seed germination IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
MF GO:0010294 abscisic acid glucosyltransferase activity IEP Neighborhood
BP GO:0010306 rhamnogalacturonan II biosynthetic process IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Neighborhood
BP GO:0010396 rhamnogalacturonan II metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0052325 cell wall pectin biosynthetic process IEP Neighborhood
BP GO:0070417 cellular response to cold IEP Neighborhood
BP GO:0071368 cellular response to cytokinin stimulus IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0071472 cellular response to salt stress IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0080113 regulation of seed growth IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1900140 regulation of seedling development IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 67 194
IPR002083 MATH/TRAF_dom 221 340
No external refs found!