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  5. AT5G26280

AT5G26280


Description : TRAF-like family protein


Gene families : OG0004283 (Archaeplastida) Phylogenetic Tree(s): OG0004283_tree ,
OG_05_0002958 (LandPlants) Phylogenetic Tree(s): OG_05_0002958_tree ,
OG_06_0001776 (SeedPlants) Phylogenetic Tree(s): OG_06_0001776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G26280
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT1G58270 ZW9 TRAF-like family protein 0.03 Archaeplastida
AT2G04170 No alias TRAF-like family protein 0.06 Archaeplastida
AT2G04190 No alias TRAF-like family protein 0.08 Archaeplastida
AT3G28220 No alias TRAF-like family protein 0.08 Archaeplastida
AT3G46190 No alias TRAF-like family protein 0.05 Archaeplastida
AT5G26320 No alias TRAF-like family protein 0.07 Archaeplastida
GSVIVT01037800001 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037804001 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc04g008530.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport RCA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0016020 membrane IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000014 single-stranded DNA endodeoxyribonuclease activity IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0002020 protease binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004064 arylesterase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004520 endodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005242 inward rectifier potassium channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005249 voltage-gated potassium channel activity IEP Neighborhood
MF GO:0005261 cation channel activity IEP Neighborhood
MF GO:0005267 potassium channel activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006148 inosine catabolic process IEP Neighborhood
BP GO:0006152 purine nucleoside catabolic process IEP Neighborhood
BP GO:0006154 adenosine catabolic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006824 cobalt ion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007029 endoplasmic reticulum organization IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
MF GO:0008477 purine nucleosidase activity IEP Neighborhood
MF GO:0008493 tetracycline transmembrane transporter activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008825 cyclopropane-fatty-acyl-phospholipid synthase activity IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009691 cytokinin biosynthetic process IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009734 auxin-activated signaling pathway IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
MF GO:0009927 histidine phosphotransfer kinase activity IEP Neighborhood
BP GO:0009970 cellular response to sulfate starvation IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010107 potassium ion import IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
CC GO:0010168 ER body IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015087 cobalt ion transmembrane transporter activity IEP Neighborhood
MF GO:0015099 nickel cation transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015665 alcohol transmembrane transporter activity IEP Neighborhood
BP GO:0015675 nickel cation transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
BP GO:0016098 monoterpenoid metabolic process IEP Neighborhood
BP GO:0016099 monoterpenoid biosynthetic process IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022843 voltage-gated cation channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
MF GO:0030551 cyclic nucleotide binding IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
MF GO:0034768 (E)-beta-ocimene synthase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0042895 antibiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043765 T/G mismatch-specific endonuclease activity IEP Neighborhood
MF GO:0045431 flavonol synthase activity IEP Neighborhood
BP GO:0046085 adenosine metabolic process IEP Neighborhood
BP GO:0046102 inosine metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046130 purine ribonucleoside catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0047622 adenosine nucleosidase activity IEP Neighborhood
MF GO:0047724 inosine nucleosidase activity IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
MF GO:0050284 sinapate 1-glucosyltransferase activity IEP Neighborhood
MF GO:0050551 myrcene synthase activity IEP Neighborhood
MF GO:0050734 hydroxycinnamoyltransferase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0052325 cell wall pectin biosynthetic process IEP Neighborhood
BP GO:0055068 cobalt ion homeostasis IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072523 purine-containing compound catabolic process IEP Neighborhood
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Neighborhood
MF GO:0080031 methyl salicylate esterase activity IEP Neighborhood
MF GO:0080032 methyl jasmonate esterase activity IEP Neighborhood
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0080119 ER body organization IEP Neighborhood
BP GO:0080160 selenate transport IEP Neighborhood
BP GO:0090333 regulation of stomatal closure IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
MF GO:0099094 ligand-gated cation channel activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 220 339
IPR002083 MATH/TRAF_dom 66 193
No external refs found!