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  5. MA_137800g0010

MA_137800g0010


Description : component mtRPL7/L12 of large ribosomal subunit proteome


Gene families : OG0000950 (Archaeplastida) Phylogenetic Tree(s): OG0000950_tree ,
OG_05_0000673 (LandPlants) Phylogenetic Tree(s): OG_05_0000673_tree ,
OG_06_0000509 (SeedPlants) Phylogenetic Tree(s): OG_06_0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_137800g0010
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00169990 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 Archaeplastida
AT1G70190 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.07 Archaeplastida
AT3G06040 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.08 Archaeplastida
AT4G36420 No alias Ribosomal protein L12 family protein 0.1 Archaeplastida
AT4G37660 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.12 Archaeplastida
GSVIVT01007737001 No alias No description available 0.03 Archaeplastida
Gb_16973 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.04 Archaeplastida
Gb_26365 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.09 Archaeplastida
Gb_27679 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida
LOC_Os02g10540.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.08 Archaeplastida
Mp1g23110.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida
Pp3c12_17640V3.1 No alias Ribosomal protein L12 family protein 0.02 Archaeplastida
Pp3c19_21200V3.1 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.08 Archaeplastida
Pp3c21_6760V3.1 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 Archaeplastida
Solyc02g031970.1.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.08 Archaeplastida
Solyc02g092300.1.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida
Solyc09g010030.3.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.06 Archaeplastida
Zm00001e014041_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e025012_P001 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.05 Archaeplastida
Zm00001e026468_P001 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida
Zm00001e032350_P001 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008932 Ribosomal_L7/L12_oligo 85 134
IPR013823 Ribosomal_L7/L12_C 150 215
No external refs found!