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  5. MA_158585g0010

MA_158585g0010


Description : no hits & (original description: none)


Gene families : OG0002131 (Archaeplastida) Phylogenetic Tree(s): OG0002131_tree ,
OG_05_0007571 (LandPlants) Phylogenetic Tree(s): OG_05_0007571_tree ,
OG_06_0009925 (SeedPlants) Phylogenetic Tree(s): OG_06_0009925_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_158585g0010
Cluster HCCA: Cluster_491

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00255750 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00003p00213880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AT3G17205 UPL6 ubiquitin protein ligase 6 0.07 Archaeplastida
AT3G53090 UPL7 ubiquitin-protein ligase 7 0.08 Archaeplastida
Cre03.g159200 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cre06.g280300 No alias E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01034942001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Gb_04194 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Gb_22218 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
LOC_Os05g06690.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.09 Archaeplastida
Mp3g18370.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Mp7g02100.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Pp3c17_16520V3.1 No alias ubiquitin protein ligase 6 0.05 Archaeplastida
Smo443962 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Solyc01g057900.3.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida
Zm00001e039899_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!