AT1G23760 (JP630, PG3)

Aliases : JP630, PG3

Description : BURP domain-containing protein

Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0001066 (SeedPlants) Phylogenetic Tree(s): OG_06_0001066_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G23760
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00088650	evm_27.TU.AmTr_v1...	BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica	0.07	Archaeplastida
AMTR_s00059p00096660	evm_27.TU.AmTr_v1...	BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica	0.02	Archaeplastida
AMTR_s00059p00097920	evm_27.TU.AmTr_v1...	BURP domain protein RD22 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00087p00099700	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AT1G60390	PG1	polygalacturonase 1	0.03	Archaeplastida
AT1G70370	PG2	polygalacturonase 2	0.05	Archaeplastida
AT5G25610	ATRD22, RD22	BURP domain-containing protein	0.03	Archaeplastida
GSVIVT01035686001	No alias	BURP domain protein RD22 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01035703001	No alias	BURP domain protein RD22 OS=Arabidopsis thaliana	0.02	Archaeplastida
LOC_Os05g12400.1	No alias	BURP domain-containing protein 1 OS=Oryza sativa subsp....	0.05	Archaeplastida
LOC_Os08g29200.1	No alias	non-catalytic polygalacturonase regulator	0.04	Archaeplastida
MA_19057g0010	No alias	non-catalytic polygalacturonase regulator	0.03	Archaeplastida
MA_462957g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_63321g0010	No alias	BURP domain protein RD22 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_7645347g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_8888577g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c4_21630V3.1	No alias	polygalacturonase 1	0.04	Archaeplastida
Solyc01g109470.3.1	No alias	BURP domain protein USPL1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc02g062310.1.1	No alias	BURP domain-containing protein 3 OS=Oryza sativa subsp....	0.03	Archaeplastida
Solyc05g005550.4.1	No alias	non-catalytic polygalacturonase regulator	0.03	Archaeplastida
Solyc05g005560.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc08g068130.1.1	No alias	BURP domain-containing protein 3 OS=Oryza sativa subsp....	0.05	Archaeplastida
Solyc08g068140.4.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e019897_P001	No alias	BURP domain-containing protein 3 OS=Oryza sativa subsp....	0.04	Archaeplastida
Zm00001e029096_P002	No alias	BURP domain-containing protein 3 OS=Oryza sativa subsp....	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006084	acetyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0006094	gluconeogenesis	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006637	acyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
MF	GO:0008131	primary amine oxidase activity	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
BP	GO:0008219	cell death	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0009741	response to brassinosteroid	IEP	Neighborhood
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010583	response to cyclopentenone	IEP	Neighborhood
BP	GO:0010623	programmed cell death involved in cell development	IEP	Neighborhood
BP	GO:0012501	programmed cell death	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
BP	GO:0016125	sterol metabolic process	IEP	Neighborhood
BP	GO:0016126	sterol biosynthetic process	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019319	hexose biosynthetic process	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0035383	thioester metabolic process	IEP	Neighborhood
BP	GO:0042546	cell wall biogenesis	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0045298	tubulin complex	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
BP	GO:0047484	regulation of response to osmotic stress	IEP	Neighborhood
BP	GO:0048468	cell development	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0048768	root hair cell tip growth	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0080147	root hair cell development	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901421	positive regulation of response to alcohol	IEP	Neighborhood
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1905959	positive regulation of cellular response to alcohol	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004873	BURP_dom	407	619

External Links

No external refs found!

AT1G23760 (JP630, PG3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation