AT5G40330 (ATMYBRTF, ATMYB23, MYB23)

Aliases : ATMYBRTF, ATMYB23, MYB23

Description : myb domain protein 23

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0015203 (SeedPlants) Phylogenetic Tree(s): OG_06_0015203_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40330
Cluster	HCCA: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272410	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
AMTR_s00003p00271440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00006p00225600	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
AMTR_s00007p00169630	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00010p00261750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00076p00157170	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00096p00076220	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
AMTR_s00139p00079430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
AMTR_s00186p00015620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.07	Archaeplastida
AT1G63910	MYB103, AtMYB103	myb domain protein 103	0.01	Archaeplastida
AT2G47190	MYB2, ATMYB2	myb domain protein 2	0.01	Archaeplastida
AT3G01140	MYB106, NOK, AtMYB106	myb domain protein 106	0.02	Archaeplastida
AT3G01530	MYB57, ATMYB57	myb domain protein 57	0.01	Archaeplastida
AT3G02940	AtMYB107, MYB107	myb domain protein 107	0.01	Archaeplastida
AT3G08500	AtMYB83, MYB83	myb domain protein 83	0.02	Archaeplastida
AT3G23250	ATMYB15, ATY19, MYB15	myb domain protein 15	0.01	Archaeplastida
AT3G24310	MYB305, ATMYB71	myb domain protein 305	0.03	Archaeplastida
AT3G27810	ATMYB21, MYB21, ATMYB3	myb domain protein 21	0.01	Archaeplastida
AT3G28910	MYB30, ATMYB30	myb domain protein 30	0.01	Archaeplastida
AT3G29020	MYB110, AtMYB110	myb domain protein 110	0.02	Archaeplastida
AT3G30210	MYB121, ATMYB121	myb domain protein 121	0.03	Archaeplastida
AT3G47600	ATMYB94, ATMYBCP70, MYB94	myb domain protein 94	0.03	Archaeplastida
AT3G49690	MYB84, RAX3, ATMYB84	myb domain protein 84	0.01	Archaeplastida
AT3G50060	MYB77	myb domain protein 77	0.05	Archaeplastida
AT4G05100	AtMYB74, MYB74	myb domain protein 74	0.01	Archaeplastida
AT4G21440	ATMYB102, ATM4, MYB102	MYB-like 102	0.01	Archaeplastida
AT4G33450	ATMYB69, MYB69	myb domain protein 69	0.01	Archaeplastida
AT4G34990	MYB32, AtMYB32	myb domain protein 32	0.01	Archaeplastida
AT4G37260	MYB73, ATMYB73	myb domain protein 73	0.05	Archaeplastida
AT5G02320	ATMYB3R5, MYB3R-5	myb domain protein 3r-5	0.01	Archaeplastida
AT5G12870	ATMYB46, MYB46	myb domain protein 46	0.03	Archaeplastida
AT5G15310	ATMIXTA, MYB16, ATMYB16	myb domain protein 16	0.05	Archaeplastida
AT5G17800	MYB56, AtMYB56	myb domain protein 56	0.02	Archaeplastida
AT5G26660	MYB86, ATMYB86	myb domain protein 86	0.01	Archaeplastida
AT5G40350	MYB24, AtMYB24	myb domain protein 24	0.01	Archaeplastida
AT5G40360	MYB115, AtMYB115	myb domain protein 115	0.01	Archaeplastida
AT5G49330	PFG3, ATMYB111, MYB111	myb domain protein 111	0.02	Archaeplastida
AT5G52600	AtMYB82, MYB82	myb domain protein 82	0.08	Archaeplastida
AT5G62470	MYBCOV1, MYB96, ATMYB96	myb domain protein 96	0.01	Archaeplastida
AT5G67300	MYBR1, MYB44,...	myb domain protein r1	0.03	Archaeplastida
GSVIVT01000219001	No alias	No description available	0.03	Archaeplastida
GSVIVT01000449001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01000450001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01008303001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01009566001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.06	Archaeplastida
GSVIVT01010086001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
GSVIVT01017716001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01019410001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
GSVIVT01025034001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
GSVIVT01026481001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01028328001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
GSVIVT01029941001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.06	Archaeplastida
GSVIVT01034943001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01037362001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
Gb_00379	No alias	transcription factor (MYB)	0.01	Archaeplastida
Gb_02423	No alias	transcription factor (MYB)	0.05	Archaeplastida
Gb_03227	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_06298	No alias	transcription factor (MYB)	0.04	Archaeplastida
Gb_09998	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_11232	No alias	transcription factor (MYB)	0.01	Archaeplastida
Gb_22239	No alias	transcription factor (MYB)	0.01	Archaeplastida
Gb_23598	No alias	no hits & (original description: none)	0.01	Archaeplastida
Gb_24073	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_29789	No alias	transcription factor (MYB)	0.01	Archaeplastida
Gb_29933	No alias	transcription factor (MYB)	0.04	Archaeplastida
Gb_35820	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g16810.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g36460.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
LOC_Os01g45090.1	No alias	transcription factor (MYB)	0.08	Archaeplastida
LOC_Os01g52410.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
LOC_Os01g74590.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
LOC_Os02g09480.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os02g40530.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os02g41510.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os02g54520.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os03g04900.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os03g20090.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os03g38210.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os04g43680.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
LOC_Os05g48010.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os06g06740.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os06g14670.1	No alias	transcription factor (MYB)	0.06	Archaeplastida
LOC_Os06g43090.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os07g31470.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
LOC_Os07g43580.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os08g33940.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
LOC_Os09g23620.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os09g26170.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
LOC_Os09g36730.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
LOC_Os10g33810.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_10430220g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_10431212g0010	No alias	transcription factor (MYB)	0.05	Archaeplastida
MA_10431610g0040	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_117992g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_1261g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_128871g0010	No alias	transcription factor (MYB)	0.12	Archaeplastida
MA_139448g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_15502g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_15687g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_158319g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_173523g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_190973g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_246142g0010	No alias	transcription factor (MYB)	0.09	Archaeplastida
MA_278282g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_45091g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_492415g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
MA_52293g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_6277697g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_6285g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_64405g0010	No alias	transcription factor (MYB)	0.05	Archaeplastida
MA_76990g0010	No alias	transcription factor (MYB)	0.05	Archaeplastida
MA_8206949g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_948059g0010	No alias	transcription factor (MYB)	0.06	Archaeplastida
MA_97537g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9818613g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
Mp5g13040.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp5g13060.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Mp5g14610.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Pp3c15_7790V3.1	No alias	myb domain protein 55	0.02	Archaeplastida
Pp3c17_7730V3.1	No alias	myb domain protein 55	0.01	Archaeplastida
Pp3c1_1650V3.1	No alias	myb domain protein 105	0.1	Archaeplastida
Pp3c1_21610V3.1	No alias	myb domain protein 103	0.02	Archaeplastida
Pp3c1_42920V3.1	No alias	myb domain protein 103	0.02	Archaeplastida
Pp3c1_4970V3.1	No alias	myb domain protein 106	0.01	Archaeplastida
Pp3c20_8950V3.1	No alias	myb domain protein r1	0.04	Archaeplastida
Pp3c24_11770V3.1	No alias	No annotation	0.01	Archaeplastida
Pp3c25_3170V3.1	No alias	myb domain protein 16	0.01	Archaeplastida
Pp3c2_34670V3.1	No alias	myb domain protein 105	0.01	Archaeplastida
Pp3c6_9970V3.1	No alias	myb domain protein 106	0.01	Archaeplastida
Pp3c8_16720V3.1	No alias	myb-like HTH transcriptional regulator family protein	0.02	Archaeplastida
Solyc01g010910.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc01g057910.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc01g094360.3.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
Solyc02g092930.1.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc02g093740.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc03g005570.3.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
Solyc03g025870.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc03g116100.3.1	No alias	transcription factor (MYB)	0.11	Archaeplastida
Solyc03g119370.2.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
Solyc04g077260.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc04g079360.1.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc05g009230.3.1	No alias	no hits & (original description: none)	0.01	Archaeplastida
Solyc05g014290.4.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc06g009710.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc06g074910.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc06g083900.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc07g053230.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc09g090130.3.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
Solyc10g005460.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc11g069030.3.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc12g005640.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc12g099130.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e001492_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e001803_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e004140_P002	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e004568_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e005044_P002	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e007085_P001	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e007422_P001	No alias	transcription factor (MYB)	0.12	Archaeplastida
Zm00001e009453_P002	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e009831_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e010995_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e013910_P001	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e015235_P001	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e016583_P001	No alias	transcription factor (MYB)	0.06	Archaeplastida
Zm00001e017496_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e020004_P001	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e020754_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e020993_P002	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e023100_P001	No alias	transcription factor (MYB)	0.06	Archaeplastida
Zm00001e025724_P001	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e025867_P001	No alias	transcription factor (MYB)	0.07	Archaeplastida
Zm00001e026426_P001	No alias	transcription factor (MYB)	0.08	Archaeplastida
Zm00001e027003_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e028201_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e030480_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e030961_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e031799_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e034072_P001	No alias	transcription factor (MYB)	0.06	Archaeplastida
Zm00001e035619_P002	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e037510_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e037956_P001	No alias	transcription factor (MYB)	0.1	Archaeplastida
Zm00001e040334_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e041055_P001	No alias	transcription factor (MYB). transcriptional key...	0.01	Archaeplastida
Zm00001e041239_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001708	cell fate specification	RCA	Interproscan
BP	GO:0003002	regionalization	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007267	cell-cell signaling	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009913	epidermal cell differentiation	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010026	trichome differentiation	IMP	Interproscan
BP	GO:0010053	root epidermal cell differentiation	IMP	Interproscan
BP	GO:0010091	trichome branching	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0023052	signaling	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030855	epithelial cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045168	cell-cell signaling involved in cell fate commitment	None	Extended
BP	GO:0048629	trichome patterning	IGI	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0002213	defense response to insect	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Neighborhood
BP	GO:0032879	regulation of localization	IEP	Neighborhood
BP	GO:0032880	regulation of protein localization	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	67	112
IPR001005	SANT/Myb	14	61

External Links

No external refs found!

AT5G40330 (ATMYBRTF, ATMYB23, MYB23)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation