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Description : Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana (sp|q9ss83|pp220_arath : 404.0)
Gene families : OG0108995 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0092894 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0073796 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_192667g0010 | |
| Cluster | HCCA: Cluster_308 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0050661 | NADP binding | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 285 | 332 |
| IPR002885 | Pentatricopeptide_repeat | 153 | 200 |
| IPR002885 | Pentatricopeptide_repeat | 570 | 618 |
| IPR002885 | Pentatricopeptide_repeat | 672 | 719 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 432 |
| IPR002885 | Pentatricopeptide_repeat | 740 | 768 |
| IPR002885 | Pentatricopeptide_repeat | 117 | 148 |
| IPR002885 | Pentatricopeptide_repeat | 490 | 519 |
| IPR002885 | Pentatricopeptide_repeat | 461 | 484 |
| No external refs found! |