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Aliases : COR27
Description : cold regulated gene 27
Gene families : OG0004707 (Archaeplastida) Phylogenetic Tree(s): OG0004707_tree ,
OG_05_0003254 (LandPlants) Phylogenetic Tree(s): OG_05_0003254_tree ,
OG_06_0002980 (SeedPlants) Phylogenetic Tree(s): OG_06_0002980_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G42900 | |
| Cluster | HCCA: Cluster_164 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01009490001 | No alias | No description available | 0.08 | Archaeplastida | |
| GSVIVT01024176001 | No alias | No description available | 0.04 | Archaeplastida | |
| GSVIVT01031734001 | No alias | No description available | 0.09 | Archaeplastida | |
| LOC_Os03g08580.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| LOC_Os07g42650.1 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
| Solyc04g078880.3.1 | No alias | no hits & (original description: none) | 0.24 | Archaeplastida | |
| Zm00001e000619_P002 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
| Zm00001e010790_P002 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0009409 | response to cold | IEP | Interproscan |
| BP | GO:0080167 | response to karrikin | IEP | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000156 | phosphorelay response regulator activity | IEP | Neighborhood |
| MF | GO:0001047 | core promoter binding | IEP | Neighborhood |
| MF | GO:0001067 | regulatory region nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003933 | GTP cyclohydrolase activity | IEP | Neighborhood |
| MF | GO:0003935 | GTP cyclohydrolase II activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006333 | chromatin assembly or disassembly | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Neighborhood |
| BP | GO:0006878 | cellular copper ion homeostasis | IEP | Neighborhood |
| BP | GO:0007623 | circadian rhythm | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009611 | response to wounding | IEP | Neighborhood |
| BP | GO:0009804 | coumarin metabolic process | IEP | Neighborhood |
| BP | GO:0009805 | coumarin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009838 | abscission | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009911 | positive regulation of flower development | IEP | Neighborhood |
| BP | GO:0009954 | proximal/distal pattern formation | IEP | Neighborhood |
| BP | GO:0010031 | circumnutation | IEP | Neighborhood |
| BP | GO:0010227 | floral organ abscission | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032091 | negative regulation of protein binding | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0042752 | regulation of circadian rhythm | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043393 | regulation of protein binding | IEP | Neighborhood |
| MF | GO:0044212 | transcription regulatory region DNA binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0048511 | rhythmic process | IEP | Neighborhood |
| BP | GO:0048571 | long-day photoperiodism | IEP | Neighborhood |
| BP | GO:0048574 | long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048579 | negative regulation of long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048582 | positive regulation of post-embryonic development | IEP | Neighborhood |
| BP | GO:0048586 | regulation of long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0050879 | multicellular organismal movement | IEP | Neighborhood |
| BP | GO:0051098 | regulation of binding | IEP | Neighborhood |
| BP | GO:0051100 | negative regulation of binding | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0055070 | copper ion homeostasis | IEP | Neighborhood |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Neighborhood |
| MF | GO:0060089 | molecular transducer activity | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000028 | regulation of photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2000241 | regulation of reproductive process | IEP | Neighborhood |
| BP | GO:2000242 | negative regulation of reproductive process | IEP | Neighborhood |
| BP | GO:2000243 | positive regulation of reproductive process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |