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  5. MA_22977g0010

MA_22977g0010


Description : component RPL19 of LSU proteome component


Gene families : OG0001902 (Archaeplastida) Phylogenetic Tree(s): OG0001902_tree ,
OG_05_0002211 (LandPlants) Phylogenetic Tree(s): OG_05_0002211_tree ,
OG_06_0003674 (SeedPlants) Phylogenetic Tree(s): OG_06_0003674_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_22977g0010
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00066640 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AT1G02780 emb2386 Ribosomal protein L19e family protein 0.32 Archaeplastida
AT3G16780 No alias Ribosomal protein L19e family protein 0.05 Archaeplastida
AT4G02230 No alias Ribosomal protein L19e family protein 0.02 Archaeplastida
Cpa|evm.model.tig00021181.1 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
Cre02.g075700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
GSVIVT01028052001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01035096001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
Gb_23171 No alias component RPL19 of LSU proteome component 0.18 Archaeplastida
Gb_23172 No alias component RPL19 of LSU proteome component 0.1 Archaeplastida
LOC_Os03g21940.1 No alias component RPL19 of LSU proteome component 0.23 Archaeplastida
LOC_Os03g38260.1 No alias component RPL19 of LSU proteome component 0.2 Archaeplastida
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.34 Archaeplastida
Pp3c15_5130V3.1 No alias Ribosomal protein L19e family protein 0.16 Archaeplastida
Pp3c16_410V3.1 No alias Ribosomal protein L19e family protein 0.3 Archaeplastida
Pp3c18_14440V3.1 No alias Ribosomal protein L19e family protein 0.28 Archaeplastida
Pp3c21_11230V3.1 No alias Ribosomal protein L19e family protein 0.37 Archaeplastida
Pp3c22_9980V3.1 No alias Ribosomal protein L19e family protein 0.09 Archaeplastida
Pp3c25_8800V3.1 No alias Ribosomal protein L19e family protein 0.11 Archaeplastida
Pp3c9_14720V3.1 No alias Ribosomal protein L19e family protein 0.25 Archaeplastida
Smo179747 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Smo271656 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
Solyc06g009210.4.1 No alias component RPL19 of LSU proteome component 0.15 Archaeplastida
Solyc09g075430.3.1 No alias component RPL19 of LSU proteome component 0.13 Archaeplastida
Zm00001e013683_P001 No alias component RPL19 of LSU proteome component 0.06 Archaeplastida
Zm00001e020524_P001 No alias component RPL19 of LSU proteome component 0.15 Archaeplastida
Zm00001e025202_P001 No alias component RPL19 of LSU proteome component 0.29 Archaeplastida
Zm00001e036280_P001 No alias component RPL19 of LSU proteome component 0.17 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 146
No external refs found!