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  5. MA_258650g0010

MA_258650g0010


Description : no hits & (original description: none)


Gene families : OG0003666 (Archaeplastida) Phylogenetic Tree(s): OG0003666_tree ,
OG_05_0003648 (LandPlants) Phylogenetic Tree(s): OG_05_0003648_tree ,
OG_06_0005895 (SeedPlants) Phylogenetic Tree(s): OG_06_0005895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_258650g0010
Cluster HCCA: Cluster_519

Target Alias Description ECC score Gene Family Method Actions
Cre12.g514450 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.05 Archaeplastida
GSVIVT01002655001 No alias No description available 0.05 Archaeplastida
Gb_34166 No alias component SF3B2 of splicing factor 3B complex 0.02 Archaeplastida
LOC_Os02g58090.1 No alias component SF3B2 of splicing factor 3B complex 0.02 Archaeplastida
Mp7g16820.1 No alias component SF3B2 of splicing factor 3B complex 0.05 Archaeplastida
Pp3c14_10510V3.1 No alias proline-rich spliceosome-associated (PSP) family protein 0.02 Archaeplastida
Pp3c17_13490V3.1 No alias proline-rich spliceosome-associated (PSP) family protein 0.02 Archaeplastida
Solyc02g078610.4.1 No alias component SF3B2 of splicing factor 3B complex 0.04 Archaeplastida
Solyc03g006520.3.1 No alias component SF3B2 of splicing factor 3B complex 0.03 Archaeplastida
Zm00001e013359_P002 No alias component SF3B2 of splicing factor 3B complex 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!