AT5G46700 (TET1, TRN2)

Aliases : TET1, TRN2

Description : Tetraspanin family protein

Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G46700
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01019805001	No alias	Tetraspanin-10 OS=Arabidopsis thaliana	0.05	Archaeplastida
MA_909581g0010	No alias	Tetraspanin-8 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Pp3c8_3750V3.1	No alias	tetraspanin10	0.02	Archaeplastida
Solyc03g059390.3.1	No alias	Tetraspanin-2 OS=Arabidopsis thaliana...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
BP	GO:0003002	regionalization	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0007389	pattern specification process	RCA	Interproscan
BP	GO:0007568	aging	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008361	regulation of cell size	RCA	Interproscan
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009914	hormone transport	None	Extended
BP	GO:0009926	auxin polar transport	RCA	Interproscan
BP	GO:0009933	meristem structural organization	IMP	Interproscan
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0009956	radial pattern formation	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010015	root morphogenesis	IMP	Interproscan
BP	GO:0010015	root morphogenesis	RCA	Interproscan
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010073	meristem maintenance	RCA	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010305	leaf vascular tissue pattern formation	IMP	Interproscan
BP	GO:0010817	regulation of hormone levels	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0040007	growth	RCA	Interproscan
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048532	anatomical structure arrangement	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0060918	auxin transport	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000280	nuclear division	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003756	protein disulfide isomerase activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
CC	GO:0005768	endosome	IEP	Neighborhood
CC	GO:0005802	trans-Golgi network	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0006997	nucleus organization	IEP	Neighborhood
BP	GO:0007000	nucleolus organization	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0009626	plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0009816	defense response to bacterium, incompatible interaction	IEP	Neighborhood
BP	GO:0009817	defense response to fungus, incompatible interaction	IEP	Neighborhood
BP	GO:0010088	phloem development	IEP	Neighborhood
BP	GO:0010232	vascular transport	IEP	Neighborhood
BP	GO:0010233	phloem transport	IEP	Neighborhood
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0012501	programmed cell death	IEP	Neighborhood
CC	GO:0016324	apical plasma membrane	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Neighborhood
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Neighborhood
BP	GO:0022622	root system development	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
CC	GO:0031410	cytoplasmic vesicle	IEP	Neighborhood
BP	GO:0031647	regulation of protein stability	IEP	Neighborhood
CC	GO:0031982	vesicle	IEP	Neighborhood
CC	GO:0031984	organelle subcompartment	IEP	Neighborhood
BP	GO:0034050	host programmed cell death induced by symbiont	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
BP	GO:0050821	protein stabilization	IEP	Neighborhood
MF	GO:0051879	Hsp90 protein binding	IEP	Neighborhood
CC	GO:0097708	intracellular vesicle	IEP	Neighborhood
CC	GO:0098590	plasma membrane region	IEP	Neighborhood
CC	GO:0098791	Golgi subcompartment	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018499	Tetraspanin/Peripherin	6	251

External Links

No external refs found!

AT5G46700 (TET1, TRN2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation