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  5. MA_34255g0010

MA_34255g0010


Description : DDT domain-containing protein DDR4 OS=Arabidopsis thaliana (sp|f4idy7|ddr4_arath : 159.0)


Gene families : OG0002074 (Archaeplastida) Phylogenetic Tree(s): OG0002074_tree ,
OG_05_0002134 (LandPlants) Phylogenetic Tree(s): OG_05_0002134_tree ,
OG_06_0002239 (SeedPlants) Phylogenetic Tree(s): OG_06_0002239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_34255g0010
Cluster HCCA: Cluster_485

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020825.11 No alias No description available 0.02 Archaeplastida
LOC_Os07g09580.1 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.04 Archaeplastida
Mp3g01850.1 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c1_8040V3.1 No alias DDT domain superfamily 0.04 Archaeplastida
Pp3c2_28350V3.1 No alias DDT domain superfamily 0.02 Archaeplastida
Solyc03g113500.4.1 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e006041_P001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e033055_P001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!