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  5. AT5G47590

AT5G47590


Description : Heat shock protein HSP20/alpha crystallin family


Gene families : OG0012967 (Archaeplastida) Phylogenetic Tree(s): OG0012967_tree ,
OG_05_0012929 (LandPlants) Phylogenetic Tree(s): OG_05_0012929_tree ,
OG_06_0012968 (SeedPlants) Phylogenetic Tree(s): OG_06_0012968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G47590
Cluster HCCA: Cluster_89


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0000811 GINS complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008824 cyanate hydratase activity IEP Neighborhood
BP GO:0009439 cyanate metabolic process IEP Neighborhood
BP GO:0009440 cyanate catabolic process IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016604 nuclear body IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
CC GO:0031261 DNA replication preinitiation complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0035061 interchromatin granule IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!