AT5G48670 (FEM111, AGL80)

Aliases : FEM111, AGL80

Description : AGAMOUS-like 80

Gene families : OG0002515 (Archaeplastida) Phylogenetic Tree(s): OG0002515_tree ,
OG_05_0001893 (LandPlants) Phylogenetic Tree(s): OG_05_0001893_tree ,
OG_06_0001162 (SeedPlants) Phylogenetic Tree(s): OG_06_0001162_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G48670
Cluster	HCCA: Cluster_160

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009612	response to mechanical stimulus	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019722	calcium-mediated signaling	RCA	Interproscan
BP	GO:0019932	second-messenger-mediated signaling	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
CC	GO:0043076	megasporocyte nucleus	None	Extended
CC	GO:0043078	polar nucleus	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005777	peroxisome	IEP	Neighborhood
CC	GO:0005778	peroxisomal membrane	IEP	Neighborhood
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Neighborhood
BP	GO:0007005	mitochondrion organization	IEP	Neighborhood
BP	GO:0007031	peroxisome organization	IEP	Neighborhood
MF	GO:0008312	7S RNA binding	IEP	Neighborhood
CC	GO:0031903	microbody membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0042579	microbody	IEP	Neighborhood
CC	GO:0044438	microbody part	IEP	Neighborhood
CC	GO:0044439	peroxisomal part	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	11	51

External Links

No external refs found!

AT5G48670 (FEM111, AGL80)

Expression Profile

Co-expression Networks

Functional Annotation